Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1730g00003 ATGGGCATGGACTCCGTCCATGAACTTCAATTCTCCGGCTACAGCAGCACCACCACACCAACCAAGGATGATGATTATGCCGCCGGTTGCCATTGGAACCACTGGTCCCCCCTTGTCAACTGGGAAGCCTTCGCCGGCGCCGAAGACGATTTCCACGGCCTCATAGAGTCCATGATAGATGACTCTGCCGGCATCCTCAGCCCCCAACACGGAACGGAAGAAGGCTGCAACTCGGCCAACTCTTCCTCGACTGAAGTAACCCTGGTGGACGAAGAGTTAAGCGACGGTGTCGAGGATTTCAAGGGTCTCAGGCTGGTGCACCTTCTGATGGCGGCCGCCGAAGCCCTCGCCGGCGCCAATAAGAGCCATGATCTGGCTCGAGTGATATTGATTCGGCTCAAGGAGTTGGTTTCCCCCACCGACGGCTCCAACATGGAGAGGTTGGCGGCGTATTTTACGGAAGCCTTGCAGGGTTTGCTAGAAAGCGCGGGGGACTCACAGGATAACAGCCATCACCACAGGCATTTCATCGGCAATGGACCCCACCGTGAGGACCACCCTCCGATGGATATGCTGGCCGCCTTCCAGCTCCTTCAGGACATGTCCCCTTACGTCAAGTTCGGCCACTTCACCGCAAATCAGGCCATCCTGGAGGCCGTGGCCAACGAGAGGCGAGTCCACATCATCGATTACGACATCATGGAAGGCATCCAGTGGGCCTCCTTAATTCAGGCCCTCGCAGCCAAAACAGACGGCCTGCCCGGACCACACCTCAGGATCACCGCATTGTCCAGGAGCGGAGGCGGAAGAAGATCCATCGCCACCGTGCAACAGACGGGGCGTCGTTTGACGGCGTTCGCGTCTTCCGTGGGTCAACCGTTCTCGTTTCATCAATGCAGGTTGGACTCAGACGAAACATTCCGACCTTCGGGTCTGAAGCTGGTTCGAGGAGAGACCCTGGTGTTCAACTGCATGCTGCATCTTCCCCACCTCACTCACCGGGCATCCGAATCGGTGGCATCGTTCATGAACGGAGCGAAGACGTTGAATCCGAGGCTAGTGGCACTGGTTGAGGAGGAGACCGGGGTGAGCGGAGACGGGGGGTTTGTGAGTCGTTTCATGGACTGTTTGCACCATTACTCGGCCCTTTACGACTCGCTGGAGGCGGGGATACCCATGCAAAGCGGGGCGAGGACGTTGGTGGAGCGGGTGTATTTGGGTCCCCGAATAGCGGGGAGGGTGGCGAGGATATACAGAAACGGGTGTGAAGAGGAGAGAGGATCGTGGGGAGAGAGCTTGGGGGAGATGGGGTACAAGGGAGTGGCCATGAGCTTCGCAAACCAATGCCAGGCGAATCTGCTATTGGGACTGTTCAACGATGGCTATAAGGCAGAGGTGTTGGGCTGCAATAAGTTGGTGTTGAGTTGGAGATGTAGGCGTTTGCTTTCCGCCTCTCTTTGGACATCTTCTTCCCCCACTGCTTCTTCTCAATCCTAG 1497 0.5725 MGMDSVHELQFSGYSSTTTPTKDDDYAAGCHWNHWSPLVNWEAFAGAEDDFHGLIESMIDDSAGILSPQHGTEEGCNSANSSSTEVTLVDEELSDGVEDFKGLRLVHLLMAAAEALAGANKSHDLARVILIRLKELVSPTDGSNMERLAAYFTEALQGLLESAGDSQDNSHHHRHFIGNGPHREDHPPMDMLAAFQLLQDMSPYVKFGHFTANQAILEAVANERRVHIIDYDIMEGIQWASLIQALAAKTDGLPGPHLRITALSRSGGGRRSIATVQQTGRRLTAFASSVGQPFSFHQCRLDSDETFRPSGLKLVRGETLVFNCMLHLPHLTHRASESVASFMNGAKTLNPRLVALVEEETGVSGDGGFVSRFMDCLHHYSALYDSLEAGIPMQSGARTLVERVYLGPRIAGRVARIYRNGCEEERGSWGESLGEMGYKGVAMSFANQCQANLLLGLFNDGYKAEVLGCNKLVLSWRCRRLLSASLWTSSSPTASSQS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1730g00003 498 MobiDBLite consensus disorder prediction 166 183 - -
Pral1730g00003 498 MobiDBLite consensus disorder prediction 163 183 - -
Pral1730g00003 498 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 85 482 IPR005202 -
Pral1730g00003 498 Pfam GRAS domain family 105 488 IPR005202 -
Pral1730g00003 498 ProSiteProfiles GRAS family profile. 96 488 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1730g00003 Pral-Chr1730 20815 22311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1730g00003 102 489 GRAS Transcription Factor Family AT5G41920 34.430 2.36e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral1730g00003 GRAS 2.4e-96 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1730g00003 - - qsa:O6P43_015209 654.825