Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1719g00006 ATGTTTCGAAGAGAATCGGACGTGGTCTCCGTAAAAATTCTCATTGTAGGGTCTGCTGATCTTGTTATGAGAACTGGAAGGCGTTCAACAGTTTTGACTATTTTTTATCATGCACGGCGTGTGTTAAACTGCAAAATGAGGGGCAGAAGCTACAGTTACAGTCCCTCACCTCCAAGGGGTTATAGCAGAAGACGCCGCAGTCCTAGTCCCCGTGGTCGTTATGGGGGCCGTGGTAGGGACTTGCCAACTAGTCTTCTGGTTAGGAACCTTCACAGAGATTGCAGGGCAGAAGATCTACGAGGACCTTTTGGCCACTTTGGTCCTCTCAAGGATGTTTACCTACCTCGCGATTATTATACTGGGGAGCCACGTGGATTTGGATTTGTCCAATATGTGGATCCAGCTGATGCTGCGGATGCTAAATATCACATGGACGGTCAAATTCTACTTGGTCGTGAGTTGACTGTGGTGTTTGCTGAGGAAAACAGAAAGAAGCCGGCTGAAATGAGAGCCAGAGAGCGATATAGGAGCCGATCATACAGGAGGTCTCCGCCTCGTTATTCTTACTCACCACGCTATGCTCGAACCTATTCCGGCAGCCCATATACACCTTCTCCAAGACGAAGTCGTTATTCCGGGTCAATATCACCAAGGGACCGGAGGTATAGGGAGCGATCATACTCCAGATCACCTTACAGGGAACGATCATATTCAAGAAGCCCTAGTCGAAGCAGGAGTCCAAGTTATTACTAG 753 0.4834 MFRRESDVVSVKILIVGSADLVMRTGRRSTVLTIFYHARRVLNCKMRGRSYSYSPSPPRGYSRRRRSPSPRGRYGGRGRDLPTSLLVRNLHRDCRAEDLRGPFGHFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPAEMRARERYRSRSYRRSPPRYSYSPRYARTYSGSPYTPSPRRSRYSGSISPRDRRYRERSYSRSPYRERSYSRSPSRSRSPSYY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1719g00006 250 Gene3D - 79 247 IPR012677 -
Pral1719g00006 250 MobiDBLite consensus disorder prediction 49 80 - -
Pral1719g00006 250 MobiDBLite consensus disorder prediction 213 240 - -
Pral1719g00006 250 SMART rrm1_1 84 157 IPR000504 GO:0003723
Pral1719g00006 250 SUPERFAMILY RNA-binding domain, RBD 83 186 IPR035979 GO:0003676
Pral1719g00006 250 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 83 161 IPR000504 GO:0003723
Pral1719g00006 250 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 82 244 - -
Pral1719g00006 250 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 85 154 IPR000504 GO:0003723
Pral1719g00006 250 MobiDBLite consensus disorder prediction 193 212 - -
Pral1719g00006 250 MobiDBLite consensus disorder prediction 165 250 - -
Pral1719g00006 250 MobiDBLite consensus disorder prediction 165 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1719g00006 Pral-Chr1719 27303 29878 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1719g00006 83 215 Eukaryotic Initiation Factors Gene Family AT2G36660 28.261 4.09e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1719g00006 K12900 - jre:108985117 221.476