Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1711g00001 ATGGCAGAGATTGTGATCTCAATCGTGTCAAAGGTTGCAGAATACTTAGTGGCTCCGATTTCACATGGAGCTGCGTATTTTTTCTGCTTTAAGCAGCTTAATGAAGACTTCAAGAAAGCAAAACAAGAGCTAGAGGTGAAACTAGAAGATGTGAGAAAGCGTACGGAAGAAGCAGAACGAAAAACTGAAGAAATAATGCCATCCGTGAAGAAGTGGTTGGATGATGTGAATGCTATCCTAGGAGAGGTACAAAAGCTGCAACAAGAGCTTGATCGAGGACGAAACAATTGTTTCAATGTGTCTGTTAGATACTCATTATCCAAACAAATAAAAAATAAGGCTAAACAGATGATGGACCTCAAACAAAATTCTGACTTTCAGCCATTTTCCCAGGTGATCCAACTTCCTGGAATTACCTACTTCTCTTCCAAAGAGTTTGTGGATTTCAACTCAAGGAAATCAACTTGTAATCATCTTTTGGAGGCAATTAAAGATGGCACGAACAAGATGGTGGGATTATATGGTATGGCAGGATCAGGCAAGACGACTTTGGCGAAGGAAGTAGGCAAGAAAGTAGATGAGCTAAAGCATTTTGACAAGGTCATCATGGCAGTCGTTTCAAAACCCCCAAATGTTTTGAACATTCAGCAGGAAATAGCAGGGCAAATAGGCTTACAACTTCAAGAGCCAACTCAACTTACTAAAGCACAAAGGCTATCAGAAGGATTGAAAAATAAGAAGATTCTTATAATCCTGGATGATGTGTGGAGCAAACTAAGGCTTGAAGATGTTGGAATTCCATTAAATGAAGGTTGTTGTGTATTGTTGACCACTCGCCTCCATGATGTATGTGTTTCTATGGATTGTGAAAGTATTATTAAATTGCCTCTCTTAACAGAGGAAGAGTCATGGGCATTGTTCAAGATGTGCGTTAAAACAGCCAATGTGTCAATGAATGAGTTTGATAGCATTGGAAGGCAAATTGTTGATGAGTGTAAAGGTTTGCCTATTGCAATAGTGACAGTCGGAAGCACATTAAAAGGAAAGAGTATTCAAGCGTGGAAGTCAACACTAAGGAGGCTACAACGTCCCCTACCATTGGATATTGAAGATGATTTGAAGACCCCTTATGCATGTGTTGAATTAAGTTATGATAATTTGCCGAGTGCACTAGCCAAGTCGCTCTTCATATTGTGTTCTATGTTTCCTGAGGATCATGAAATCCATATAGAGGATTTAATTCGTTTTGGCAACGGGACTCTAAAGCTTGGTGACGATATTCATACAATAGGGGAAGCAAGGAATGAGATTTTTGCAGCTATTGAGAAATTGTTAGATTCTTGTTTGTTAATGAATACCAATAAGCAGGAACGTGTAAAATTGCATGATGTTGTTCGAGATGTAGCCTTATGGATCACGAAGAAGCAACATCAAGAAGTTTTGGTAGATAGCCATTCAATTTCGAGCATGCTGGTAAGCAACGGCCACAAATTGAATGATGCGAAGGCACTCTCATTGTGGAATTTGGATAAGAATTTCAAGATCTTTAATAAATTGCATTGTCCATCACTGGAGATTTTGCTACTTCAGCCTGATGGGTTCATTGAAGATATTGGAGCAATAGAAACACTTAAAGTGTTGGCACTCATAACACATGGCTTTCAATGGAGATTTCAGCAGCAAACTTTTTGCTCTGTCCCACAATCAATTGTATTGTTAACGAATCTTCAAACCTTGTGTCTTAGAGGGAAACAATTGGGTGACATCTCTTTCTTGTGTGAACTCAAAGGATTGGAGATTCTTGATTTGCATGGTTCTCTATTTAATGAATTACCTGCTGAAATTGCAGACATGAAAATGCTGAAACTTTTGGATATATTTGGTTGTGAAATTGAGAAAAGCCCTTTAGAAGTAATTAGAAGATGTGAGCAGCTTGAAGAATTATACTTCCGGGAGAAGATATCTGTCATCCCTGAGAATTTCTCTCTTTCAAGGTTGAAGAGGTATGTCATCTATGATTCCACGTGCAGAATGATTGATGAATATATGGGTAACTCTTTCCAAGAATATTTAGATAGTTGTGATGAAGCATTAAGAGCTTTATGCATACAAGGCTTCAGAATCTTTGCTTTGACTTCGTCAATGAAGGATCTCATTTTTCGGGCAAACCACCTTTGGTTAGATAATTGTTCATGGAATCATAAAGATATAAATTTTAGGATAAAGCAACTCGTGGTATCATTCTGTCAGGAGAAAAGATTCATCATGGAGAACTCTGATATGGACACTCTTCAACCACAACAAATCTTCTCAGACTTGATAACTTTACGATTGTTTAAAATGAATAGTCTTGAACAGTTGTTTGAAGCTTCATCTATCAGCTACTCTCTCCCCATGTTACAAGAGCTGTCGATACAAAGTTGTCCTGAATTGAGAACTTGCATCTTCCCCCATGCCATGGTTACGAGCTTGCCAAAGCTGAGGAGACTTGTGATTGAGGGTTGCGGCAAAGTGAAATGGTTATTCTCTTATTCTTTGGCTTCTCATTGTCCGTCCTTGGAGGAGATAATTATAGCCAATTGCTTTGAGCTTGAGAGGCTCATTGATGAAGAAGCTGCACTTGGGGATCCATTACTTCATGACATGCAATACTCTCATCCACATGTAAGTATTATTCGCGAAATCCTTCTTGAATCATTGCATATTAGAAATAATAATCCGTGTTCGTGCATTTGCTGA 2739 0.3855 MAEIVISIVSKVAEYLVAPISHGAAYFFCFKQLNEDFKKAKQELEVKLEDVRKRTEEAERKTEEIMPSVKKWLDDVNAILGEVQKLQQELDRGRNNCFNVSVRYSLSKQIKNKAKQMMDLKQNSDFQPFSQVIQLPGITYFSSKEFVDFNSRKSTCNHLLEAIKDGTNKMVGLYGMAGSGKTTLAKEVGKKVDELKHFDKVIMAVVSKPPNVLNIQQEIAGQIGLQLQEPTQLTKAQRLSEGLKNKKILIILDDVWSKLRLEDVGIPLNEGCCVLLTTRLHDVCVSMDCESIIKLPLLTEEESWALFKMCVKTANVSMNEFDSIGRQIVDECKGLPIAIVTVGSTLKGKSIQAWKSTLRRLQRPLPLDIEDDLKTPYACVELSYDNLPSALAKSLFILCSMFPEDHEIHIEDLIRFGNGTLKLGDDIHTIGEARNEIFAAIEKLLDSCLLMNTNKQERVKLHDVVRDVALWITKKQHQEVLVDSHSISSMLVSNGHKLNDAKALSLWNLDKNFKIFNKLHCPSLEILLLQPDGFIEDIGAIETLKVLALITHGFQWRFQQQTFCSVPQSIVLLTNLQTLCLRGKQLGDISFLCELKGLEILDLHGSLFNELPAEIADMKMLKLLDIFGCEIEKSPLEVIRRCEQLEELYFREKISVIPENFSLSRLKRYVIYDSTCRMIDEYMGNSFQEYLDSCDEALRALCIQGFRIFALTSSMKDLIFRANHLWLDNCSWNHKDINFRIKQLVVSFCQEKRFIMENSDMDTLQPQQIFSDLITLRLFKMNSLEQLFEASSISYSLPMLQELSIQSCPELRTCIFPHAMVTSLPKLRRLVIEGCGKVKWLFSYSLASHCPSLEEIIIANCFELERLIDEEAALGDPLLHDMQYSHPHVSIIREILLESLHIRNNNPCSCIC 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1711g00001 912 Gene3D - 381 470 IPR036388 -
Pral1711g00001 912 Gene3D - 297 380 IPR042197 -
Pral1711g00001 912 Pfam NB-ARC domain 157 386 IPR002182 GO:0043531
Pral1711g00001 912 SUPERFAMILY L domain-like 461 868 - -
Pral1711g00001 912 FunFam Probable disease resistance protein At1g61300 141 291 - -
Pral1711g00001 912 Gene3D - 141 293 IPR027417 -
Pral1711g00001 912 Gene3D Ribonuclease Inhibitor 733 910 IPR032675 -
Pral1711g00001 912 Gene3D Ribonuclease Inhibitor 503 685 IPR032675 -
Pral1711g00001 912 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 399 IPR027417 -
Pral1711g00001 912 Coils Coil 30 61 - -
Pral1711g00001 912 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 32 904 - -
Pral1711g00001 912 SMART AAA_5 167 297 IPR003593 GO:0016887
Pral1711g00001 912 PRINTS Disease resistance protein signature 242 256 - -
Pral1711g00001 912 PRINTS Disease resistance protein signature 332 346 - -
Pral1711g00001 912 PRINTS Disease resistance protein signature 616 632 - -
Pral1711g00001 912 PRINTS Disease resistance protein signature 170 185 - -
Pral1711g00001 912 Coils Coil 69 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1711g00001 Pral-Chr1711 3566 6304 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1711g00001 169 480 WRKY Transcription Factor Family AT5G45050 23.529 9.44e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1711g00001 - - pcin:129306241 1070.07