Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1708g00002 ATGGCGAATCTGACAACCAGCTCACAAATTTGCATCAGAATCGTCATAGCTTTTCTCCAGTTCCTTTCAACTGTTCAAGCTGGTAACAAAGAAGAGAAAGAGCGAATTAAAAGTGTGGCCAAAATTCTGAAAGAGATTTTCAAGATTAGCCAAGAAATGGTGGAAGATGATCAGAAACTTAGGAGGCCTGGTGGGATTCTCGTAACTTTGTTTAGCACGCCTCAAGATGATAATACTGAAGAACTTGAGGATTCTGAGAATGAACCTTGTAGCTCCACTGCACCAACTACTAAACGAACCTCTTCTTCAAAAGGAGGCGTAATGGTGGCGGGTAGGAACATGGCAAACTTACAGAAAGATTTCAAACAAGCAGTATTAAAGAATGGAGGTCTCGAATGTCTGGTTGGTCACAACAACCCCAAAAAGAGAATCCATGGCATTATTGGGAAAATTTTCAACGAAGCTCTCGGGGTGATTCGACAAGAAAAACCTTTCAGATTTAACATGAAGGACGTGGCTGAGACGCTCAAAACACTGGGGAACAAGGCCATGGAAACCAATTGTTACACCAAAGCTGCTGAATTTTACAGTTGTGCTATTGCAATTAACGTGGACAATGCTGTCTACTATTGCAATAGAGGGGCGGCATTGATCAAAATGGGGAGGTTTCATGAAGCCGTTCGTGACTGCTGTAAAGCAATTATCCTGAACCCTACCTACATAAAAGCTTACTATCGCTTAGGTTTAGCTTACAGTGAACAAGGAAATTCTTTGATGCTATATGCGATGCTAGAGGCCATGAATAAAGCTGCCTTGGCCCAAATTGAGCTAGCAGAAGGCAGACTGAGTGAACAACTTTCTTGGTTGGACGATAAGCTTGAAGATCTGAGGAAAAGTGGTATGATTAGCCGATGCCGGAAAGTAGGAATCAAGGAAGGGACAACAATAGTGTATAAAGGGAAAGCAGAAGATGGTGATTCTGAGAAATTTGTGTTGCTTGAAGACGAGGTCGATACTTCCAACATTAACATTGAAGAAGAGACCATGAGTATTGCAGAATTTATCGACCTCTTCTCTAATTCCAACATGGCTCCTTAA 1098 0.418 MANLTTSSQICIRIVIAFLQFLSTVQAGNKEEKERIKSVAKILKEIFKISQEMVEDDQKLRRPGGILVTLFSTPQDDNTEELEDSENEPCSSTAPTTKRTSSSKGGVMVAGRNMANLQKDFKQAVLKNGGLECLVGHNNPKKRIHGIIGKIFNEALGVIRQEKPFRFNMKDVAETLKTLGNKAMETNCYTKAAEFYSCAIAINVDNAVYYCNRGAALIKMGRFHEAVRDCCKAIILNPTYIKAYYRLGLAYSEQGNSLMLYAMLEAMNKAALAQIELAEGRLSEQLSWLDDKLEDLRKSGMISRCRKVGIKEGTTIVYKGKAEDGDSEKFVLLEDEVDTSNINIEEETMSIAEFIDLFSNSNMAP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1708g00002 365 MobiDBLite consensus disorder prediction 76 105 - -
Pral1708g00002 365 MobiDBLite consensus disorder prediction 88 105 - -
Pral1708g00002 365 SUPERFAMILY TPR-like 172 255 IPR011990 GO:0005515
Pral1708g00002 365 ProSiteProfiles TPR repeat profile. 207 240 IPR019734 GO:0005515
Pral1708g00002 365 Gene3D Tetratricopeptide repeat domain 154 295 IPR011990 GO:0005515
Pral1708g00002 365 PANTHER LD24721P 1 256 IPR047150 -
Pral1708g00002 365 Pfam Tetratricopeptide repeat 209 239 IPR019734 GO:0005515
Pral1708g00002 365 SMART tpr_5 173 206 IPR019734 GO:0005515
Pral1708g00002 365 SMART tpr_5 207 240 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1708g00002 Pral-Chr1708 24613 27957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1708g00002 172 250 U-box Gene Family AT3G07370 35.443 4.05e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1708g00002 K16365 - pcin:129285647 263.077