Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1706g00002 ATGGATAACAAGACTACCTTTGACTACTCCGACATAGTTCTTCTACAATCAATCCGGAGCTACCTTCTTGATGACGAATCCGATGCTCTCATTGCCACTCCGGCCACATTCGCCAGCGACGCTCCGGTTTGCCGCCTGATTTTTAGCTCCGGGATGACGGAGAACAGCGACGGTGAGATTAGCTCTCCATCTTTCTCGTCCGAACAAGCAAACACTGCCACTGTGGCGGAGGTTTGCAATGCGGATGCAGCGGAGCGTGGAGTTCACGCGCCGCCGAGTGGGAGGGGCTACAGAGGAGTGAGGCGGAGGCCGTGGGGGAAGTACGCTGCGGAGATTAGAGATCCGAAGAAGAGCGGCGCCAGAGTGTGGCTTGGGACTTATGAGACGGCTGAGGACGCGGCTTTGGCTTATGATCAAGCCGCGTTCAAGATGCGCGGCTCCAAAGCCAAGCTGAATTTTCCTCATCTTATTGGCTCTAACATGTCGGAGCCACCGAGAGTGACCGGAAAGCGGCGGTGCCCGGAGCCTTGGAAGGAGGACGCATGGACGGAGGTTAACAGGGGAAAGAGCCTAGTGAACTTGTCCATGCGGCATACACGTGAGCCAAGCATTGGAAGCCAAGATGTGGAGTTGTAG 636 0.5597 MDNKTTFDYSDIVLLQSIRSYLLDDESDALIATPATFASDAPVCRLIFSSGMTENSDGEISSPSFSSEQANTATVAEVCNADAAERGVHAPPSGRGYRGVRRRPWGKYAAEIRDPKKSGARVWLGTYETAEDAALAYDQAAFKMRGSKAKLNFPHLIGSNMSEPPRVTGKRRCPEPWKEDAWTEVNRGKSLVNLSMRHTREPSIGSQDVEL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1706g00002 211 PRINTS Ethylene responsive element binding protein signature 120 136 IPR001471 GO:0003700|GO:0006355
Pral1706g00002 211 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Pral1706g00002 211 ProSiteProfiles AP2/ERF domain profile. 96 154 IPR001471 GO:0003700|GO:0006355
Pral1706g00002 211 FunFam Ethylene-responsive transcription factor 2 95 155 - -
Pral1706g00002 211 CDD AP2 104 156 IPR001471 GO:0003700|GO:0006355
Pral1706g00002 211 SMART rav1_2 96 160 IPR001471 GO:0003700|GO:0006355
Pral1706g00002 211 Pfam AP2 domain 96 146 IPR001471 GO:0003700|GO:0006355
Pral1706g00002 211 SUPERFAMILY DNA-binding domain 96 155 IPR016177 GO:0003677
Pral1706g00002 211 Gene3D AP2/ERF domain 96 155 IPR036955 GO:0003700|GO:0006355
Pral1706g00002 211 PANTHER DNA-BINDING DOMAIN 72 168 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1706g00002 Pral-Chr1706 11047 11682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1706g00002 87 193 AP2-EREBP Transcription Factor Family AT2G44840 67.593 4.17e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral1706g00002 AP2 1.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1706g00002 K09286 - qsa:O6P43_026941 176.407