Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1702g00004 ATGATCAGGTTTATCGTAAACAGAGGAGTGCAAGCTTCGACTTCGCGGAAGTCTCTTGCCTTTTTCAGCCTCTCACGGTCTGCTCATTCATCATTTGCAACTGTTGAAGTTGAAGAGATATCAGGCTCCAGACCTGCTGAAGTTCAAAACTTGGTGCAAGGTAAATGGATAGGATCCTCGAAGTGGAACACTATTGTGGATCCTTTAAATGGAGAGCCCTTTATTAAAGTTGCTGATGTTGATGAAACGGGCATTCAGCCTTTTGTGGAAAGCTTGTCCAGCTGTCCGAAACATGGTCTGCACAATCCCTTTAAAGAACCAGAGAGATATCTTTTGTTTGGAGAAATATCTGCTAAGGCAGCTCACATGCTATCACTTCCAAAGGTTTCAGATTTCTTTACAAGGCTAATACAACGGGTTTCTCCAAAGAGTTATGCACAGGCTCATGCAGAAGTTTATGTAACAAGCAAGTTTCTAGAGAATTTTTCGGGAGATCAGGTTCGTTTCTTGGCAAGGTCTTTTGCAGTACCTGGAAATCACCTTGGACAGCAGAGTCATGGTTTTCGCTGGCCATATGGCCCAGTGGCACTCATTACTCCTTTTAATTTTCCCTTAGAGATACCAGTCCTTCAGTTAATGGGTGCACTTTACATGGGCAACAAACCAGTTCTTAAAGTTGACAGCAAGGTGAGCATCGTCATGGACCAAATGCTACGTCTGCTTCATTGCTGTGGGTTGCCTGTTGAAGATGTTGACTTCATCAATTCTGATGGAAAGACAATGAACAAGCTATTGCTGGAGGCAAAACCCCGAATGACCCTTTTCACTGGTAGCTCAAGAGTGGCTGAAAAATTGGCCCTTGATTTAAAGGGCCGCATTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTCCAAGAGGAAGATTATGTTGCCTGGGTCTGTGACCAGGATGCATATGCATGTAGTGGCCAGAAATGCTCGGCACAATCATTGTTATTTATTCATGAGAACTGGTCTAAAGATTCTCTGATATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGCTAGAAGACTTGACCATTGGTCCCGTCTTGACTGTAACAACTGAAGCAATGCTAGAGCACAAGAATAACTTGCTTCAGATACCAGGTTCAAAGCTGCTCTTTGGGGGCCAGCCTTTAGAGAAACATACAATTCCTTCGATATATGGTGCTATAAAACCAACTGCCATTTATATTCCTCTTGAGGAAATTGTGAAGGAAAAAAATTATGAGCTTGTTACAAAAGAAATTTTTGGCCCCTTCCAGGTTATTACTGACTATACAAGCGATCAACTCCCAGTGGTACTAGATGCTTTGGAGAGAATGGATGCACATTTAACGGCTGCTGTAGTTTCAAATGATCCCCACTTTTTACAGGAAGTCGTTGGCAAAACAGTAAATGGGACAACTTATGCTGGTCTAAGAGCGAGAACTACTGGAGCTCCGCAGAACCACTGGTTTGGACCTGCTGGGGATCCTAGAGGCGCAGGAATCGGAACGCCTGAGGCGATAAGGCTTGTCTGGTCTTGCCACAGAGAGATTATTTATGATGTCGGTCCCATCCCCAAGAATTGGGAAACTCCACCTTCATCGTAA 1653 0.4362 MIRFIVNRGVQASTSRKSLAFFSLSRSAHSSFATVEVEEISGSRPAEVQNLVQGKWIGSSKWNTIVDPLNGEPFIKVADVDETGIQPFVESLSSCPKHGLHNPFKEPERYLLFGEISAKAAHMLSLPKVSDFFTRLIQRVSPKSYAQAHAEVYVTSKFLENFSGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVALITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMDQMLRLLHCCGLPVEDVDFINSDGKTMNKLLLEAKPRMTLFTGSSRVAEKLALDLKGRIKLEDAGFDWKILGPDVQEEDYVAWVCDQDAYACSGQKCSAQSLLFIHENWSKDSLISKLKDLAERRKLEDLTIGPVLTVTTEAMLEHKNNLLQIPGSKLLFGGQPLEKHTIPSIYGAIKPTAIYIPLEEIVKEKNYELVTKEIFGPFQVITDYTSDQLPVVLDALERMDAHLTAAVVSNDPHFLQEVVGKTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIRLVWSCHREIIYDVGPIPKNWETPPSS 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1702g00004 550 FunFam Aldehyde dehydrogenase 12 307 495 - -
Pral1702g00004 550 Pfam Aldehyde dehydrogenase family 116 492 IPR015590 GO:0016491
Pral1702g00004 550 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 40 299 IPR016162 GO:0016491
Pral1702g00004 550 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 493 IPR016163 GO:0016620
Pral1702g00004 550 SUPERFAMILY ALDH-like 48 518 IPR016161 GO:0016491
Pral1702g00004 550 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 324 335 IPR016160 GO:0016491
Pral1702g00004 550 CDD ALDH_F12_P5CDH 50 538 - -
Pral1702g00004 550 FunFam probable aldehyde dehydrogenase 41 299 - -
Pral1702g00004 550 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 29 549 IPR044638 GO:0004029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1702g00004 Pral-Chr1702 29013 36666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1702g00004 1 550 Aldehyde Dehydrogenase Gene Family AT5G62530 79.496 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1702g00004 K00294 - qsa:O6P43_022809 969.148