Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1702g00003 ATGAATTTGCAGAGCGGTCTTCCCCTGCTTTTGCAACAATACACAGCGCTTCTGAAGAAGAACTTCTTGCTCTCATGGCGCAACAGGATGGGTTCGTTACTCCAACTTCTCTTTCCTCTCTTCTTCATGTTCCTTATGTTCGCCGTTGATAGGGCCATGCAGGCACGCTACTCCTCATCTACAGCCAACGAGAGCGTCACCGATCCCGGCACGTTGATTTCTCCTCCGATTACTCCCTGTGAGGAGAAGTTCTTCATTAAGCTTCCTTGCTATGATTTTGTTTGGAGCGGAAATGGAAGCCCCAAATTCCAGACCATTGTCAGTCGTATCATGGCAAACAATCCTGGCCGTCCTATACCTTCCTCTAAGGTTTTATCCTTTAGCAATGCAGCTGAAGTGGATGACTGGCTTTTCAAGAATCCTCTGCGTTGTCCAGGTGCTCTACATTTCACCGAAAAAAATGCAACTGTCATTGGCTATGGTGTGCAGACAAATTCAACCTTTATACAACAGCGAGGGCGCTATGAAGACCCCACTTTTGCATTTCAACTCCCACTCCAGCTTGCTGCGGAGCGTGAAATTGCTAGATACCTGATTGGAGATCCATCCTTCAGCTGGAGCTTTTCTTTCAGAGAATTTGCACACCCTGCTATAGAATCTTTCTCTACAGTGGGTACAATAGGTCCAGCATTTTTCCTTGCAATCTCCAGGCTTAACTTTGTTCTTCAGATGGAATCTTTGGCTAGAGAAAAAGAAAATAAGCTTCGTCAGGCAATGACGATGATGGGCCTCTATGACTCCGCTTACTGGTTATCCTGGCTTACCTGGGAGGCAGTTATTACTCTTATCACATCACTTCTCATAGTTCTTTTGGGAATGATGTTTCAGTTTGATGCTTTTGTGAAAAACAATTTTGCAGTCGTGTTTTTTCTGTTCTTCCTTTTTGAACTCAGCATGACGGGATTTGCCTTCATGTTATCTGCTTTCATTCGTAAATCATCTTCAGCCCCAACAGTGGCATTCGCTGTATTTATTATCGGCATTTTGACTCAGATCGTTGTACTAGCAGGATATCCGTATGATAATGACAACTCCGAGGTTTTCCGAACTGTCTGGTCATTTTTCCCACCAAATCCATTTACTCAAGGTTTGCATGTGCTTTCACAAGCAACATCCACTCCTGAAGGCGATGGTGTTAGATGGAGTAAACGTGGTGAATGTGCTCCAAACAACGAAGATTGTTTCATAACAATTAATGGTATCTATATGTGGCTGTTGGGTACATTCTTTCTGTGGTTTATTCTGGCTATCTACTTTGATAACATAATCCCAAATGCATCCGGTGTGAGGAAATCAGTCTTCTATTTCCTAAAGCCCGGATACTGGATGGGAAAAGGAGATAAAGTGAGAGAGGGTGGGGTTTGTAGTTGTGTAGGTTCAGTCCCGCCACAAGAGTATATCACACCAGATGATGAAGATGTCCTTGAAGAGGAAAACGTCGTAAAGCAGCAAGCAGCAGAATGTATGGTAGACCCAAATGTCGCTGTTCAGATACGTGGCCTTGCAAAGACATATCCTGGTGCATTGAACATTGGTTGCTGCTCTAAATGCCAAAAAACTGCTTTCAAAGCTGTTAAGGGCTTATGGGTAAATTTTGCAAAGGATCAGTTGTTTTGTCTGCTGGGTCCCAATGGAGCCGGGAAAACTACTGTTATTAATTGTTTGACTGGGATAACTCCAGTTACTGATGGAGATGCATTGATATATGGACACTCCATACGAAGCTCCACCAGCATGTCAAACATTCAAAAGCTTATAGGCGTCTGTCCCCAGTTTGATATCTTATGGGATGCATTGTCTGGTCAAGAACACCTCCATCTCTTTGCTAGCATTAAAGGGCTTCCCCCTTCTTCTATCAAATCAATTACTCAGAAGTCATTAGCAGAAGTAAGACTCAGAGAATCAGCCAAAGTAAGAGCTGGAAGTTACAGTGGAGGAATGAAACGCCGTCTAAGTGTTGCCATTTCCCTTATTGGTGATCCCAAGCTAATCATTATGGATGAACCGACAACTGGCATGGATCCTATAACAAGGAGGCATGTGTGGGACATAATTGAAAATGCAAAACGGGGCCGTGCTATTGTCCTTACGACACACTCTATGGAAGAGGCTGACATTCTAAGCGACCGCATAGGAATCATGGCAAAAGGAAGACTTCGCTGCATTGGCACCTCAGTACGGTTGAAATCACGATTTGGTACTGGTTTTATAGCTAATATCAGGTTCCATGATGCAACTTCTACAAGAAATCATGAGACAGTGAAGCAATTCTTTAAGAATTTAGATGTGGTACCAAAAGAAGAGAACAGTGCCTACTTAACTTATGTGATTCCTCATGATAGAGAGGGACTCTTGATGAATTTTTTTGAGGAACTCCACGATAAAGAAGAAGAATTTGGCATATCTGACATCCAGCTGGGTCTTGCAACTCTCGAAGAGGTTTTCTTGAATATTGCAAGAAAAGCAGAGCTAGAAAGTGCTGCAGCTGAGGGGAGCTTGACAAATCTGACGTTGACTTCTGGTGAATCTGTTAAGATACCTGTGGGAGCAAGGTTTGTGGGGATTCCCGGAACTGAATCTGCTGAAAACCCCAGAGGGATTATGGTGGAAGTATATTGGGAGCAAGATGATACGGGTGCCCTCTGCATTGCTGGACACTCGCGGCAAGTTTCTGTTCCTCCCAGTGTTGAAGTATCTGCTCCTCCATCCTTAACAAGACGTCGAAGTAACAGGAGGTCAGAAACGGTTGAGGGCATTGTGATTGATCCCAGTCAAGTTAGTACTGTCAATTTCCAGTAA 2859 0.4376 MNLQSGLPLLLQQYTALLKKNFLLSWRNRMGSLLQLLFPLFFMFLMFAVDRAMQARYSSSTANESVTDPGTLISPPITPCEEKFFIKLPCYDFVWSGNGSPKFQTIVSRIMANNPGRPIPSSKVLSFSNAAEVDDWLFKNPLRCPGALHFTEKNATVIGYGVQTNSTFIQQRGRYEDPTFAFQLPLQLAAEREIARYLIGDPSFSWSFSFREFAHPAIESFSTVGTIGPAFFLAISRLNFVLQMESLAREKENKLRQAMTMMGLYDSAYWLSWLTWEAVITLITSLLIVLLGMMFQFDAFVKNNFAVVFFLFFLFELSMTGFAFMLSAFIRKSSSAPTVAFAVFIIGILTQIVVLAGYPYDNDNSEVFRTVWSFFPPNPFTQGLHVLSQATSTPEGDGVRWSKRGECAPNNEDCFITINGIYMWLLGTFFLWFILAIYFDNIIPNASGVRKSVFYFLKPGYWMGKGDKVREGGVCSCVGSVPPQEYITPDDEDVLEEENVVKQQAAECMVDPNVAVQIRGLAKTYPGALNIGCCSKCQKTAFKAVKGLWVNFAKDQLFCLLGPNGAGKTTVINCLTGITPVTDGDALIYGHSIRSSTSMSNIQKLIGVCPQFDILWDALSGQEHLHLFASIKGLPPSSIKSITQKSLAEVRLRESAKVRAGSYSGGMKRRLSVAISLIGDPKLIIMDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSVRLKSRFGTGFIANIRFHDATSTRNHETVKQFFKNLDVVPKEENSAYLTYVIPHDREGLLMNFFEELHDKEEEFGISDIQLGLATLEEVFLNIARKAELESAAAEGSLTNLTLTSGESVKIPVGARFVGIPGTESAENPRGIMVEVYWEQDDTGALCIAGHSRQVSVPPSVEVSAPPSLTRRRSNRRSETVEGIVIDPSQVSTVNFQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1702g00003 952 CDD ABC_subfamily_A 516 749 - -
Pral1702g00003 952 Gene3D - 504 788 IPR027417 -
Pral1702g00003 952 SMART AAA_5 554 738 IPR003593 GO:0016887
Pral1702g00003 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 541 743 IPR027417 -
Pral1702g00003 952 MobiDBLite consensus disorder prediction 913 936 - -
Pral1702g00003 952 Pfam ABC-2 family transporter protein 32 438 IPR013525 GO:0016020|GO:0140359
Pral1702g00003 952 ProSitePatterns ABC transporters family signature. 663 677 IPR017871 GO:0005524|GO:0016887
Pral1702g00003 952 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 490 844 IPR026082 GO:0016020|GO:0055085|GO:0140359
Pral1702g00003 952 FunFam ABC transporter A family member 2 506 769 - -
Pral1702g00003 952 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 516 761 IPR003439 GO:0005524
Pral1702g00003 952 Pfam ABC transporter 548 690 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1702g00003 Pral-Chr1702 21568 28137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1702g00003 556 773 Calmodulin-binding Proteins AT2G36910 22.707 3.58e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1702g00003 - - gmx:100786538 1389.02