Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1702g00001 ATGATTTTGCAGAGCGGTCTTCCCCTGCTTTTGCAACAATACACAGCGCTTTTGAAGAAGAACTTCTTGCTCTCATGGCGCAACAGGAAGGCTTCGTTCCTCCAACTTCTCTCTCCACTCTTCTTCATGTTCCTTATATTTGCCATAGATAGGGCCATTCAGGCTCGCTACTCTTCGTCTACGGCCAACGAGAGCGTCACCGATCCTGGCACGCTGACCTCTCCTCCGATTACTCCCTGTGAGGAGAAGTTCTTTGTTAAACTTCCCTGCTATGATTTTGTTTGGAGCGGAAATGGGAACCCCAAATTTCAGACCATTGTCAATCGTATCATGGCTAACAATCCTGGCCGGCCCATACCTTCCTCTAAGGTTATATCCTTTGGCAATGCAGCTGAAGTGGATGACTGGCTTTTTAATGATCCTATGCGTTGTCCAGGTGCTCTACATTTCAACGAAAAAAATGCGACTGCCATTGGCTATGGTGTACAGACAAATTCAACCTTTATACAAAAGCGAGGGCGCTATGAAGACCCCACTTTTTCGTTTCAACTCCCACTTCAGCTTGCGGCAGAGCGTGAAATTGCTAGATACCTGATTGGAGATCCATCCTTCAGCTGGAGCTTTTCTTTCAAAGAATTTGCACACCCTGCCATAGAATTTTTCTCTACGGTGGGTTCAGTAGGTCCAGCATTTTTCCTTGCCATCGCCATGTTTAACTTTGTTCTTCAGATGGGCTCCTTGGTGACAGAAAAAGAAAATAAACTTCGTCAGGCAATGATGATGATGGGCCTCTATGACTCTGCTTACTGGTTATCCTGGCTTACCTGGGAGGCAGTTATTACACTCATCTCATCACTTCTCATAGTTCTTTTCGGAATGATGTTTCAATTCGATGTTTTCCTGAAAAACAATTTCGCAGTCGTGTTTCTTCTGTTCTTCCTTTTTGAACTCAGCATGATGGGATTTGCCTTCATGTTATCTGCTTTCATTCGTAAATCATCTTCAGCCACAACAATGGGATTCTCTATATTTATTATCGGCTTTATTACTCAGATCGTTGTGCAAGCGGGATATCCATATGATAATGACAGCTCCCAGGCTTTCCGAGTTGTCTGGTCATTTTTCCCACCAAATCCATTTGCTCAAGGTCTAAATGTGCTTTCGCAAGCAACTTCCACTCCTGAAGACGATGGTGTTAGATGGAGTAAACGGGGAGAATGTGCTCCAAATGACGAGGATTGTTACATAACAATTAATGGTATCTATATGTGGCTGTTGGGTACATTCTTTCTGTGGTTTATTCTGGCTATCTACTTTGATAACATAATGCCGAATGCATCTGGCGTAAGGAAATCAGTCTTCTATTTCCTAAAGCCCGGATACTGGATGGGAAAAGGAGATAAAGTGAGAGAGGGTGGGGTTTGTAGTTGTGTAGGCTCAGTCCCACCACAAGAGTATATCACACCAGATGATGAAGATGTCCTTGAAGAGGAAAACGTTGTAAAGCAGCAAGCAGCAGAATGTATGGTAGACCCAAATGTCGCTGTTCAGATACGTGGCCTTGCAAAGACATATCCTGGTGCATTGACCATTGGTTGCTGCTGTAAATGCAAAAGAACTACCGCTTTCCACGCTGTTAAGGGCTTATGGGTAAATTTTGCAAAGGATCAGTTGTTTTGTCTTCTGGGACCAAATGGAGCTGGGAAAACTACTGTTATTAATTGTTTGACTGGGATAACTCCGGCTACCGATGGAGATGCATTGATATACGGACACTCCATAAGAAGCTCCACTGGCATGTCAAACATTCAAAAGCTTATAGGCGTCTGCCCCCAGTTTGATATCTTGTGGGATGCATTGTCTGGTCAAGAGCACCTACATCTCTTTGCCAGCATTAAAGGGCTTCCCCCTTCATCTATCAAATCATTTACTGAAAAGTCATTAGCAGAAGTGAGACTCACAGAGTCAGCCAAAGTGAGAGCTGGAAGCTACAGTGGGGGAATGAAACGTCGTCTCAGTGTTGCCATTTCCCTAATTGGTGATCCCAAGCTAGTCATTATGGATGAACCGACAACTGGCATGGATCCAATAACAAGGAGGCATGTGTGGGACATAATCGAAAATGCAAAACAAGGGCGTGCCATTGTCCTTACAACACACTCTATGGAAGAGGCTGACATTCTAAGCGACCGCATAGGAATCATGGCAAAAGGAAAACTTCGTTGCATTGGCACCTCAATACGGCTAAAATCACGTTTTGGTACTGGTTTTATAGCTAATATCAGTTTCCATGGAAACAATTTTGAACAAAGTCCTGCCAATAGAGATGCAACTCCTACAAGAAATCATGAGACAGTGAAGCAATTCTTCAAGAATAATTTAGATGTGGTACCAAAAGAAGAGAACAGTGCCTACTTAACTTATGTGATTCCTCATGATAGGGAGGGAGTCTTGATGAACTTTTTCGAGGAACTTCAAGATAGAGAAGAAGAATTTGGCATATCTGACATCCAGCTGGGTCTTGCAACTCTCGAAGAGGTTTTCTTGAATATTGCAAGACAAGCAGAGCTAGAAAGTGCTACGGCTGAAGGGAGCTCGACAATTCTGACGTTGACTTCTGGTGAATCTGTTAAGATACCTGTGGGAGCAAGGTTTGTGGGGATTCCAGGAACTGAATCTGCTGAAAACCCCAGAGGGATTATGGTAGAAGTATATTGGGAGCAAGATGATACGGGTGCCCTCTGCATTGCTGGACACTCAGGGCAAGTTCCTGTGCCTCCTAGTGTTGAAATATCTGCTCCTCCATCCTTAACAAGACGTCGAAGTCGCAGGCGGTTAGCACCTGTTGAGGGCATTGTGATTGACCCCAGTCAAGTTAGTACTGTCAATTTCCAGTAA 2898 0.4403 MILQSGLPLLLQQYTALLKKNFLLSWRNRKASFLQLLSPLFFMFLIFAIDRAIQARYSSSTANESVTDPGTLTSPPITPCEEKFFVKLPCYDFVWSGNGNPKFQTIVNRIMANNPGRPIPSSKVISFGNAAEVDDWLFNDPMRCPGALHFNEKNATAIGYGVQTNSTFIQKRGRYEDPTFSFQLPLQLAAEREIARYLIGDPSFSWSFSFKEFAHPAIEFFSTVGSVGPAFFLAIAMFNFVLQMGSLVTEKENKLRQAMMMMGLYDSAYWLSWLTWEAVITLISSLLIVLFGMMFQFDVFLKNNFAVVFLLFFLFELSMMGFAFMLSAFIRKSSSATTMGFSIFIIGFITQIVVQAGYPYDNDSSQAFRVVWSFFPPNPFAQGLNVLSQATSTPEDDGVRWSKRGECAPNDEDCYITINGIYMWLLGTFFLWFILAIYFDNIMPNASGVRKSVFYFLKPGYWMGKGDKVREGGVCSCVGSVPPQEYITPDDEDVLEEENVVKQQAAECMVDPNVAVQIRGLAKTYPGALTIGCCCKCKRTTAFHAVKGLWVNFAKDQLFCLLGPNGAGKTTVINCLTGITPATDGDALIYGHSIRSSTGMSNIQKLIGVCPQFDILWDALSGQEHLHLFASIKGLPPSSIKSFTEKSLAEVRLTESAKVRAGSYSGGMKRRLSVAISLIGDPKLVIMDEPTTGMDPITRRHVWDIIENAKQGRAIVLTTHSMEEADILSDRIGIMAKGKLRCIGTSIRLKSRFGTGFIANISFHGNNFEQSPANRDATPTRNHETVKQFFKNNLDVVPKEENSAYLTYVIPHDREGVLMNFFEELQDREEEFGISDIQLGLATLEEVFLNIARQAELESATAEGSSTILTLTSGESVKIPVGARFVGIPGTESAENPRGIMVEVYWEQDDTGALCIAGHSGQVPVPPSVEISAPPSLTRRRSRRRLAPVEGIVIDPSQVSTVNFQ 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1702g00001 965 Gene3D - 504 788 IPR027417 -
Pral1702g00001 965 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 490 858 IPR026082 GO:0016020|GO:0055085|GO:0140359
Pral1702g00001 965 SMART AAA_5 555 739 IPR003593 GO:0016887
Pral1702g00001 965 Pfam ABC transporter 549 691 IPR003439 GO:0005524
Pral1702g00001 965 FunFam ABC transporter A family member 2 506 770 - -
Pral1702g00001 965 ProSitePatterns ABC transporters family signature. 664 678 IPR017871 GO:0005524|GO:0016887
Pral1702g00001 965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 539 744 IPR027417 -
Pral1702g00001 965 CDD ABC_subfamily_A 516 750 - -
Pral1702g00001 965 Pfam ABC-2 family transporter protein 33 438 IPR013525 GO:0016020|GO:0140359
Pral1702g00001 965 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 516 762 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1702g00001 Pral-Chr1702 8363 14837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1702g00001 557 761 Calmodulin-binding Proteins AT2G36910 21.860 7.00e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1702g00001 - - gmx:100786538 1465.67