Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1697g00003 ATGATGGCTCAGTCACCACAATCTCAGTCTCAGTCCAAGCCTCTTCACAACAAAGAGAGCAATCACCAATCACCAATAATAGATGACGTTGAAGATGAGAGTTTCTGCTGCGCCATGCAGCTCGCGACCTCCTCCGCGATTTCCATGGCGATGCAAACAGCGGTGGAGCTCGGCGTCTTCGACGTCATTAATAGAGCTGGTCACGACGCCAAGCTCTCCGCCGCTGAGATCGCGACGGAGCTTTCTTTCAAGAACTCCGAAGCGCCTTCCGCACTCGATCGTCTCCTCTGGCTTCTAGCGTCGCACTCTGTTCTTTCCTGTTCCGTCATCACCGATGAGGATCGAGGGCCGGGGTGTTTCCGACGAGTGTACGGCCTCCGTCCGGTGGCCAAATTCTTTGCGAGAAATGAGGATGGAGTGTCGTTGGGCCCTTTTATTGCGTTGAATCAAGATAAGGTCTTTCTTGATAGCTGGCGAGAATTGAAGAATGCAATATGTGAAGGAGGCATAGCGTTCAATAGGGTGTATGGCTCACATGCTTTTGAGTATCCGGGATTGGATTCAAGGTTTAACGATGTCTTCAACAAGGCAATGGTGAATCAGACCACCTTAGTTGTGACCAAAATTCTTGAATCCTACCGAGGTTTCGAGGACATCACCCGACTTGTTGACGTTGGTGGAGGTCATGGGGTTACTCTAAGCTTGATCACTACTAAATATCCTCACGTTCAAGGAATCAATTTCGACCTGCCTCATGTCATCCAGCACGCTCCTCCTTACTCTGGAGTCGAACATCTGGGAGGAGATATGTTTGAAAGCGTGCCCCCAGGAGATGCCATCTTCATGAAGTGGATACTTCACGATTGGAGTGACGAATGGTGCTTGAAGCTGTTGAAGAACTGTCACAATGCCATTCCTGAAGATGGAAAAGTGATTGTGGTGGACGCAGTTTTGCCCATTATACCAGAGACTTCTGCTGCTGCAAAGACCACTTCCCAACTTGATGTGATGATGATGACTCAGAACCCAGGTGGCAAAGAGAGAAGTGAGCAAGAGTTCATGGAATTGGCTACGGCAGCAGGATTTAGTGGCATCAGATATGAATGTTTTGTTCGTAACTTTTGGATTATGGAATTCTTCAAATAG 1146 0.4843 MMAQSPQSQSQSKPLHNKESNHQSPIIDDVEDESFCCAMQLATSSAISMAMQTAVELGVFDVINRAGHDAKLSAAEIATELSFKNSEAPSALDRLLWLLASHSVLSCSVITDEDRGPGCFRRVYGLRPVAKFFARNEDGVSLGPFIALNQDKVFLDSWRELKNAICEGGIAFNRVYGSHAFEYPGLDSRFNDVFNKAMVNQTTLVVTKILESYRGFEDITRLVDVGGGHGVTLSLITTKYPHVQGINFDLPHVIQHAPPYSGVEHLGGDMFESVPPGDAIFMKWILHDWSDEWCLKLLKNCHNAIPEDGKVIVVDAVLPIIPETSAAAKTTSQLDVMMMTQNPGGKERSEQEFMELATAAGFSGIRYECFVRNFWIMEFFK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1697g00003 381 Pfam O-methyltransferase domain 158 363 IPR001077 GO:0008171
Pral1697g00003 381 Pfam Dimerisation domain 49 100 IPR012967 GO:0046983
Pral1697g00003 381 Gene3D Vaccinia Virus protein VP39 134 381 IPR029063 -
Pral1697g00003 381 MobiDBLite consensus disorder prediction 1 21 - -
Pral1697g00003 381 PANTHER O-METHYLTRANSFERASE 38 366 IPR016461 GO:0008168
Pral1697g00003 381 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 379 IPR029063 -
Pral1697g00003 381 PIRSF O-mtase 16 381 IPR016461 GO:0008168
Pral1697g00003 381 FunFam Caffeic acid O-methyltransferase 134 381 - -
Pral1697g00003 381 FunFam Caffeic acid 3-O-methyltransferase 16 133 - -
Pral1697g00003 381 CDD AdoMet_MTases 221 318 - -
Pral1697g00003 381 Gene3D - 15 133 IPR036388 -
Pral1697g00003 381 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 39 381 IPR016461 GO:0008168
Pral1697g00003 381 MobiDBLite consensus disorder prediction 1 23 - -
Pral1697g00003 381 SUPERFAMILY "Winged helix" DNA-binding domain 31 136 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1697g00003 Pral-Chr1697 25888 27968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1697g00003 31 381 Monolignol Biosynthesis Gene Families AT5G54160 52.707 1.27e-136 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1697g00003 K13066 - gmx:100803633 511.146