Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1697g00002 ATGCAGCTCGCGACCTCCACTGCGATTTCCATGGCGATGCAAACAGCGGTGGAGCTCGGCGTCTTCGACGTCATTCATAGAGCTGGTCACGGCGCCAAGCTCTCCGCCGCTGAGATCGCGACTGGGCTTTCTTGCAAGAACTCCGAAGCGCCTTCCGCCCTCGATCGTGTCCTCCGGCTTCTAGCGTCGCACTCTGTTCTTACCTGTTCCGTCATCACCGATGAGGACCGAGGGCCGGGGTGTTCCCGACGAGTGTACGGCCTCCGTCCGGTGGCCAAATTCTTCGCGAGAAATGAAGATGGGGTGTCGTTGGGCCCTTTTATTGCGTTGATTCAAGATAAGGTCTTCCTTGATAGCTGGCGAGAATTGAAGGATGCAATATGTGAAGGAGGTATAGCGTTCGATAGGGTGCATGGCTCACATGCTTTCGAATATCCGAGATTGGATTCAAGGTTTAACGATGTCTTCAACAAGGCAATGGTGAATCAGACCACCTTAGTTGTGACCAAAATTCTTGAATCCTACCGAGGTGTCGAGGACATCACCCGACTCGTCGACGTTGGTGGAGGTCTTGGGGTTACTCTAAGCTTGATCACTAATAAATATCCTCACGTTCAAGGAATCAATTTCGACCTGCCTCATGTCATCCAGCACGCTCCTCCTTATCCTGGAGTCGAACATATGGGAGGAGATATGTTTGAAAGCGTGCCTCAAGGAGATGCCATCTTCATGAAGTGGATACTTCATGATTGGAGTGATGAATGGTGCTTGAAGCTGTTGAAGAACTGTTACAATGCAATTCCTGAAGATGGAAAAGTGGTCGTGATAGACGCAGTTTTGCCCATTGTACCACAGACTTCTGCTGCGGCAAAGAGCACCTCCCAGCTTGATCTCGTAATGCTGACTCAGAACCCAGGTGGCAAAGAGAGAAGTGAGCAAGAGTTCATGGAATTGGCTACGGCAGCAGGGTTTAGTGGCATCAGATATGAATGTTTTGTTCGTAACTTTTGGATTATGGAATTCTTCAAATAG 1032 0.4971 MQLATSTAISMAMQTAVELGVFDVIHRAGHGAKLSAAEIATGLSCKNSEAPSALDRVLRLLASHSVLTCSVITDEDRGPGCSRRVYGLRPVAKFFARNEDGVSLGPFIALIQDKVFLDSWRELKDAICEGGIAFDRVHGSHAFEYPRLDSRFNDVFNKAMVNQTTLVVTKILESYRGVEDITRLVDVGGGLGVTLSLITNKYPHVQGINFDLPHVIQHAPPYPGVEHMGGDMFESVPQGDAIFMKWILHDWSDEWCLKLLKNCYNAIPEDGKVVVIDAVLPIVPQTSAAAKSTSQLDLVMLTQNPGGKERSEQEFMELATAAGFSGIRYECFVRNFWIMEFFK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1697g00002 343 PANTHER O-METHYLTRANSFERASE 3 328 IPR016461 GO:0008168
Pral1697g00002 343 Pfam O-methyltransferase domain 120 325 IPR001077 GO:0008171
Pral1697g00002 343 PIRSF O-mtase 1 343 IPR016461 GO:0008168
Pral1697g00002 343 Gene3D Vaccinia Virus protein VP39 96 343 IPR029063 -
Pral1697g00002 343 CDD AdoMet_MTases 183 280 - -
Pral1697g00002 343 FunFam Caffeic acid 3-O-methyltransferase 1 95 - -
Pral1697g00002 343 SUPERFAMILY "Winged helix" DNA-binding domain 1 98 IPR036390 -
Pral1697g00002 343 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 343 IPR016461 GO:0008168
Pral1697g00002 343 FunFam Caffeic acid O-methyltransferase 96 343 - -
Pral1697g00002 343 Pfam Dimerisation domain 11 62 IPR012967 GO:0046983
Pral1697g00002 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 100 341 IPR029063 -
Pral1697g00002 343 Gene3D - 1 95 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1697g00002 Pral-Chr1697 18140 20848 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1697g00002 1 343 Monolignol Biosynthesis Gene Families AT5G54160 53.061 6.27e-136 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1697g00002 K13066 - qsa:O6P43_027445 507.679