Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1691g00001 ACGATTCTTATTGAGGCAGCAGCAGCACCAGATCCGCGTTCTCACCTTGCTCATGGTGCCCTTGGAAGTTGGATGAGGCGTGGTACTGTATATCACCTCAGCGTTCTGAGAGCTGAAGCTGGGGGAATCTCTCGAGCAAGTGGGATCTCCATAATCTTGAAGCGCAAGCGCAAACAAGAATTCTCGGTAGATTTTTTGGGCGACGTTGTGACGCAAGTCAGTATTCTCAACTCCAGTTTATCATCGTCCCAGTCGGATCGCCTTGCGGCCAAGCGTGCTGTTGATGTTCTCTTTGCAGTCGGACATAATGAGGCAATTCTGAATAGTATGGTGGATTGCGGAGCTGTTCCTGCTTTGTTAAAATATCTGGAAGCACCTGAACCAGTTAGAGAAGGTGATGGTGTTCCCAAGCCTTACGAGCATGAGGTGGAAAAGGGGTGTCTATTGGTCCTTGAGAGTCTTGCTTTTAAACCGGAGCATCAACAACTCATTGTTGATGCTGGAGCTTTGTCCTATCTTATGGATTTGCTAAAGAGTTACAAGACCTGTGGCAATTCAAGGGCTCTTACTGGCCTTATAAGGAGAGCAGCTTATCTCATCGCAAGCCTTGTGCAGGAAAATGACAGCATTCAAACCCGTGTTAGGATGGAAGGTGGTATCCCTCCTCTGGTTGAATTGCTTGAATTTGATAATGTAAAGGTACAAAGGGCAGCTGCAGAGGCCTTACGTAGTCTTGCATTTAAAAATGATGAGAACAAAAACCAGATTGTCAGATGCAATGCACTGCCTACTCTTGTACTAATGCTTGGATCAGAGGATGCTGCCATACGTTTTGAAGCAGTTAGCTTTGTAGGTTGGCTTGTTAGAAATCTGGTCAACTCTTCTCCACACATAAGGAGGGAAGTTCTTCTAGCTGGTGCTCTCCGACCTATAATCGGATTGCTTAGGTCTGACTGGCCGGAGAGTCAGAGAGAAGCAGCTCTTTTAATTGGAATATTTGCTGGGACAGATTCTGATTGCAAGGCTCATATTGCTCAAAGAGGGGCTATCCAGCCACTGATTGACATGCTTAAGTCCCCAGATGAACAGCTTTGGAAAGCATCAGCATTTGCGCTTGGGAGACTGGCCCAGGACGCACACAATCAAGCTGGTATTGCTTATAATGGAGGTCTAGAGCTTCTACTCAACCTTCTTTGCTCCAAGGATGGACCTCTCCAACGTAATGCAGCCTTTGCTCTGTATGGTTTTGCTGATAATGAGGAGAATGTTGCGGATATTGTTAAGGTTGGTGGTGTTCAAAAACTACAGGATGGAGATTTCATAGATGGACCTGCCAAAGAGTATGTAGGAAAGACAATGAAAAGATTAGAGGAGAAAATGCATGGACAAGTGCTGAAACAGCTGATTTATCTTATGCGTTTTGGAGAAAAGGTTGTTCAAAGACGCGTGGCTTTAGCTCTTGCTCATCTATGTGCCCCGGATGATGGAAAATTTATTTTTGTTGACAACAATGGACTCAAATCCCTACTGGATCTTCTAGAATCTACAAATATTAAACAGAATCGCGAGGCTTCAATGGCACTTCACTCATTGGCTGTGAGAACCACATCTATCTCTCCCTCTGATGCTACTCCTCCATCCTCGACTTCCCAGGTATACTTGGGCGAGCAGTATATAAACAATCCTACATTTTCTGATATCATCTTTTTAGTTGAAGGTAAAGAGTTCTATGCTCACCGAATTTGTCTACTTGCTTCCTCTGATGCGTTTCGAGCAATGCTTGATGGTTTTTATTGGGAAAAGGAAGCGAAAGAAATACAGATTCCTAACGTTAAATGGGATGTCTTTGAAGTGATGATGAGATTTATTTACACGAGAAATGTAGATGTCAACTTGGATATTGCTCAAGATCTCCTAAGAGTCTATGATCAGTATCTTCTGGATGGTCTCAAGCGATCTTGTGAGTGTGCACTTGCTCAGGATATTTCGGTGGAAAATGTCTCTCTTATCTACGAGTTATCGGAGTCGTTTAATGCTATGGCATTGAGGCATGCATGTATATTCTTTTTGTTGGCTCAATATGACAAACTGAGCGCCGAACCATGGTATAGGTACCTCATCTGTCGCATTGTCCCAGATATACGTGAATTATTCGGAAGTTTACTCACGAAGCCTACTAGCGGAATATTGGATAAGAGTCCTAGTTGA 2208 0.4389 TILIEAAAAPDPRSHLAHGALGSWMRRGTVYHLSVLRAEAGGISRASGISIILKRKRKQEFSVDFLGDVVTQVSILNSSLSSSQSDRLAAKRAVDVLFAVGHNEAILNSMVDCGAVPALLKYLEAPEPVREGDGVPKPYEHEVEKGCLLVLESLAFKPEHQQLIVDAGALSYLMDLLKSYKTCGNSRALTGLIRRAAYLIASLVQENDSIQTRVRMEGGIPPLVELLEFDNVKVQRAAAEALRSLAFKNDENKNQIVRCNALPTLVLMLGSEDAAIRFEAVSFVGWLVRNLVNSSPHIRREVLLAGALRPIIGLLRSDWPESQREAALLIGIFAGTDSDCKAHIAQRGAIQPLIDMLKSPDEQLWKASAFALGRLAQDAHNQAGIAYNGGLELLLNLLCSKDGPLQRNAAFALYGFADNEENVADIVKVGGVQKLQDGDFIDGPAKEYVGKTMKRLEEKMHGQVLKQLIYLMRFGEKVVQRRVALALAHLCAPDDGKFIFVDNNGLKSLLDLLESTNIKQNREASMALHSLAVRTTSISPSDATPPSSTSQVYLGEQYINNPTFSDIIFLVEGKEFYAHRICLLASSDAFRAMLDGFYWEKEAKEIQIPNVKWDVFEVMMRFIYTRNVDVNLDIAQDLLRVYDQYLLDGLKRSCECALAQDISVENVSLIYELSESFNAMALRHACIFFLLAQYDKLSAEPWYRYLICRIVPDIRELFGSLLTKPTSGILDKSPS 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1691g00001 735 ProSiteProfiles BTB domain profile. 565 632 IPR000210 GO:0005515
Pral1691g00001 735 SUPERFAMILY ARM repeat 462 641 IPR016024 -
Pral1691g00001 735 SMART BTB_4 565 662 IPR000210 GO:0005515
Pral1691g00001 735 SMART arm_5 103 156 IPR000225 GO:0005515
Pral1691g00001 735 SMART arm_5 157 205 IPR000225 GO:0005515
Pral1691g00001 735 SMART arm_5 493 533 IPR000225 GO:0005515
Pral1691g00001 735 SMART arm_5 337 377 IPR000225 GO:0005515
Pral1691g00001 735 SMART arm_5 249 289 IPR000225 GO:0005515
Pral1691g00001 735 SMART arm_5 378 418 IPR000225 GO:0005515
Pral1691g00001 735 SMART arm_5 207 247 IPR000225 GO:0005515
Pral1691g00001 735 SMART arm_5 295 335 IPR000225 GO:0005515
Pral1691g00001 735 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 389 431 IPR000225 GO:0005515
Pral1691g00001 735 Gene3D - 63 186 IPR011989 -
Pral1691g00001 735 Gene3D - 289 536 IPR011989 -
Pral1691g00001 735 Pfam Armadillo/beta-catenin-like repeat 214 246 IPR000225 GO:0005515
Pral1691g00001 735 Pfam Armadillo/beta-catenin-like repeat 249 282 IPR000225 GO:0005515
Pral1691g00001 735 SUPERFAMILY ARM repeat 80 437 IPR016024 -
Pral1691g00001 735 Gene3D - 187 288 IPR011989 -
Pral1691g00001 735 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 63 726 IPR044282 -
Pral1691g00001 735 Pfam BTB/POZ domain 558 660 IPR000210 GO:0005515
Pral1691g00001 735 Gene3D Potassium Channel Kv1.1; Chain A 537 691 IPR011333 -
Pral1691g00001 735 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 218 253 IPR000225 GO:0005515
Pral1691g00001 735 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 348 390 IPR000225 GO:0005515
Pral1691g00001 735 SUPERFAMILY POZ domain 556 659 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1691g00001 Pral-Chr1691 98 5736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1691g00001 195 435 U-box Gene Family AT5G67340 27.572 1.95e-13 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pral1691g00001 BTB 5.3e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1691g00001 - - sind:105165291 861.677