Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1690g00002 ATGACGGAGGCTATGATTGAGGTTGCACTTGATACTTTGAGCTCACTCATTCAGAAGGAGCTCGTTTTGTTTCTGGGTGTAGGTGGAGAAATGAGAAGGCTTTCAAGCGTACTCACTACAATCAAGGCTGTGCTCGAAGATGCTGAGGAGAAGCAACTCACCAACAAATCTCTCAAAGATTGGCTGCGCAAGCTTCGAGATGCAGCTTACGTGCTGGATGACATCTTGGATGAGTGTTCCACGCATGCCCTTTCCTTAGAGTATCAAGACAAGGTACAAGCCTCTTGCTTGTGCTCTTTCAATCCCACTCATGTGAAGTTCCGTTACAAAATTGCCAAGAAATTGAAAGGTATCAGTCAAAGACTTGATGAAATTGCTGAGGAAAGGACGAGGTTTCATTTACGCGAGACGGTTCACGAGAGGAGGAATGAAGTCATGGAATGGCGGCAAACTACCTCAATCATTACTCAAACCCCATTATATGGAAGAGAAGCAGACAAGGAGAAAATTGTGAACTTTTTGATTGGTGATGCTTCTAATTTGGAGGACGTATCAGTGTATCCAATTATTGGTATTGGCGGTCTCGGAAAAACAACCCTTGCCCAGCACATCTTCCATGATGAGAGGGTGGCTAATCATTTTGAGCTAAGAATTTGGGTATGTGTCTCTGAAGATTTCAGTTTGAAAAGGATTTCAAAAGCTATAATAGAGTCAGCTACTACTGGGCATGCTTGTGCAGATTTAGATCTAGAACCGTTACAAAGACGGCTCCAAGAGGTGCTTGGCAGAAAAAAATATTTGCTTGTCCTGGATGACGTGTGGAATGAGAAGCAGGAGGAATGGGATAAGTTGAAATTTGTTTTGGCCTGTGGATCGAAGGGTGCTTCGATTCTAGTCACTACTCGTCTTACAACAGTTGCGCGCATTGCAGGAACAGTGTCGCCTCATCAGTTATCACTGCTATCAGATAATGAGTGCTGGGAGTTGTTCAGACAACGAGCTTTTGGATCGGAGGAGGAGGCACGCGAAGAGCTTATGGCTATAGGGAGGGAGATAGTAAGGAAATGTAAAGGAGTTCCACTTGCTGCTAAAACTTTAGGAAGTCTTCTGTGTTTCCAAAGTAATGAAAATGAGTGGCTCCGCATTAAAGAAAGTGAGATTTGGAATTTACGACAGGAAGAAGATTCTATCCTGCCTGCTTTAAGATTAAGTTATTTGAATTTATCGGCAAAATTGAGACGGTGTTTTGCCTACCTAGCAGTGTTTCCCAAAGATCAAGCGATGAGGAAGAAACAGGTAATAGAACTTTGGATGGCTAATGGGTTTATTTCAACCAATGGAGAGTTTGAAGTGGAAGATGATGGTGATAGAGTGTGGAATGAATTGTATTTAAAGTCTTTTTTTGTGGATGTTCTGATAGATCAATTTGACCACACATGGTTTAAGATTCATGACCTTGTTCATGATTTAGCCCAATCTGTAATGGGGGAAGAATGTTATAACGGAACATGCGAGAATGGCCCACCTAGTGAAAGAACTCATCACCTCTTACTTGATGGCAATGACCAATTTCCTAACATATGGTCATCTCATTTGAAAAAGGTCAAATTCTTAAAAACATTTATAGTACAAGAAAATGATTTTGAAATCAACACTAGATTGCTAAAATGTTATCATTTGCGAGCGCTTGACCTGAAGTTTTTAAATGAGGTGCCATCTTCTATTGACCAATTAAAACATATGAGGTACTTGAACCTTTCTGGTGGTGAATTTACAATGCTTCCTGATTCGATATGTAAACTATGGAACTTGCAAATTTTGAATTTGAACGGGTGTTGCTTTCTCAAAAAGTTGCCTAATCAGTTGAAGTACTTAAAGTCTCTCCGTCATCTATGTTTGAATGGGTGCCCGTCATTATCCAGATTGGCCCCGAAAATGCGCCAACTAACTTGCTTAAAGACCTTAAGTGTATATATTATTGGTGTGCAAGAAGGGTTCTTATTGGAGGAAGTAGGAAATTTGAAACTTGAAGGAACACTCGACATCGAGCACTTGGAGAGAGTGAAAAGCCCAATGGATGCCAAAAAAGCCAACTTGGCCGATAAACGCCTCGACGAGTTGGAGTTGTCTTGGAAAAGGAACGGGCAATCCCAGTTACAAGAAAACGAGGAGGAAATTCTTGAAGCTCTTGAACCTCATAAGCAACTTAAATGTTTGGTTGTAAAAGGATATCTTGGCACCCAACTCCCACAATGGATGATTAATCCTACGCTCAAAGATTTAATTTCCCTACAACTCAAGGGTTGTAAAAATCTTGTACGTGTTTCGTGCCTGGCAAAACTTCCGTCTTTGAAGCGTCTGAGCTTGGAGAACATGAATCACGTGCAATATATAGATGAGGAATCTTATGTTGATGGGGTTGACAGAGGCTTCCAAGCTCTGGAAGGTCTAGAGCTGTTAAGGCTACCGAGCATTGTAAAGTTGTCAAGGGAGGATGGAGACAGCATGTTCCCACGTCTCTCAAAGTTGGACATCACTCATTGTCCGCAACTAAACTTGCCTTTCCTTCCATCCATCACTCAACTACAAGTTACAAATGGATGTAGCAAGGAGTTAGTTGGTTCAATTCATCAAAATCTGCCCAATCTTGAATGCCTTGCTTTGTCCGGAGATGGAGAGTTGACTTCCTTTCCAGAAGAGATGTTAGTAGGCCTTAAGCACCTTCACGCCAACTTGAAGGCTCTCGAACAATTGCAAATTAGTGAATGCAACAACCTTGAGACAATTACAGAGGAAGCGTCGCGAGGGTTGTGTTCTCTTAAAAATCTCTTTATTAGTGAGTGTCCTAAATTCAAACTGTCTACAGGTTTTGGACACCTCATAGCCCTTGAAGCTCTAACTATTGATAGATGTGTGGAGGTGAAAGATATCCATGATGCTTTACAGCATATTATGACCCTTCGATTGGTACGATTGTCTGATCTCCCAAATCTAGCGTCCTTGCCTGACTGGTTGGGGAACCTTGGGTTGCTTGAGTCATTGTATATATCTGGATGCCCCAAGTTGATGTCACTTCCGATGAACACTCAGAGCCTTACAAATTTGAAATATTTGTCCATTTGCGGTTGTCCGAAATTATGGAAGAGATGCAAGGAGGGAACAGGGAAGGACTGGCACAAAATTGCTCATGTTCCCTGTCGTGATATAAAAGATTAA 3216 0.417 MTEAMIEVALDTLSSLIQKELVLFLGVGGEMRRLSSVLTTIKAVLEDAEEKQLTNKSLKDWLRKLRDAAYVLDDILDECSTHALSLEYQDKVQASCLCSFNPTHVKFRYKIAKKLKGISQRLDEIAEERTRFHLRETVHERRNEVMEWRQTTSIITQTPLYGREADKEKIVNFLIGDASNLEDVSVYPIIGIGGLGKTTLAQHIFHDERVANHFELRIWVCVSEDFSLKRISKAIIESATTGHACADLDLEPLQRRLQEVLGRKKYLLVLDDVWNEKQEEWDKLKFVLACGSKGASILVTTRLTTVARIAGTVSPHQLSLLSDNECWELFRQRAFGSEEEAREELMAIGREIVRKCKGVPLAAKTLGSLLCFQSNENEWLRIKESEIWNLRQEEDSILPALRLSYLNLSAKLRRCFAYLAVFPKDQAMRKKQVIELWMANGFISTNGEFEVEDDGDRVWNELYLKSFFVDVLIDQFDHTWFKIHDLVHDLAQSVMGEECYNGTCENGPPSERTHHLLLDGNDQFPNIWSSHLKKVKFLKTFIVQENDFEINTRLLKCYHLRALDLKFLNEVPSSIDQLKHMRYLNLSGGEFTMLPDSICKLWNLQILNLNGCCFLKKLPNQLKYLKSLRHLCLNGCPSLSRLAPKMRQLTCLKTLSVYIIGVQEGFLLEEVGNLKLEGTLDIEHLERVKSPMDAKKANLADKRLDELELSWKRNGQSQLQENEEEILEALEPHKQLKCLVVKGYLGTQLPQWMINPTLKDLISLQLKGCKNLVRVSCLAKLPSLKRLSLENMNHVQYIDEESYVDGVDRGFQALEGLELLRLPSIVKLSREDGDSMFPRLSKLDITHCPQLNLPFLPSITQLQVTNGCSKELVGSIHQNLPNLECLALSGDGELTSFPEEMLVGLKHLHANLKALEQLQISECNNLETITEEASRGLCSLKNLFISECPKFKLSTGFGHLIALEALTIDRCVEVKDIHDALQHIMTLRLVRLSDLPNLASLPDWLGNLGLLESLYISGCPKLMSLPMNTQSLTNLKYLSICGCPKLWKRCKEGTGKDWHKIAHVPCRDIKD 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1690g00002 1071 Gene3D - 5 145 - -
Pral1690g00002 1071 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 419 IPR027417 -
Pral1690g00002 1071 Gene3D - 410 493 IPR036388 -
Pral1690g00002 1071 Gene3D Ribonuclease Inhibitor 853 1054 IPR032675 -
Pral1690g00002 1071 Pfam Rx N-terminal domain 6 100 IPR041118 -
Pral1690g00002 1071 SUPERFAMILY L domain-like 482 863 - -
Pral1690g00002 1071 FunFam Probable disease resistance protein At1g61300 142 313 - -
Pral1690g00002 1071 SUPERFAMILY L domain-like 840 1044 - -
Pral1690g00002 1071 Gene3D Ribonuclease Inhibitor 507 852 IPR032675 -
Pral1690g00002 1071 PRINTS Disease resistance protein signature 910 926 - -
Pral1690g00002 1071 PRINTS Disease resistance protein signature 186 201 - -
Pral1690g00002 1071 PRINTS Disease resistance protein signature 260 274 - -
Pral1690g00002 1071 PRINTS Disease resistance protein signature 356 370 - -
Pral1690g00002 1071 Coils Coil 31 51 - -
Pral1690g00002 1071 Pfam NB-ARC domain 164 405 IPR002182 GO:0043531
Pral1690g00002 1071 CDD RX-CC_like 3 127 IPR038005 -
Pral1690g00002 1071 Gene3D - 146 313 IPR027417 -
Pral1690g00002 1071 Gene3D - 320 409 IPR042197 -
Pral1690g00002 1071 PANTHER DISEASE RESISTANCE PROTEIN RP 40 848 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1690g00002 Pral-Chr1690 4940 20235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1690g00002 183 650 WRKY Transcription Factor Family AT5G45050 20.751 1.28e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1690g00002 - - tpra:123906781 1086.63