Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1688g00020 ATGACAGAGGTAACTTTACAAATACAACATCCTGATAGAGTAAGCACAATTGGGCTATGTCGAGGAGATATCACACCAGATGAATGCCATGCTTGCCTCAAGAATGCCTCACTTATTCTCCCTATGTCGTGTCCAAATATGAGGGAGGCTATGGCAGGCTCCGACGAGTGCTTTCTCCGACAATCAAACTGCTCAATATTTAGGGTCATGGAATCTAACGCTTCGTGCATATGGTGGAACAGGTATGATACAGCAGAGCAGGACAAGTACAATGAAGTTAGTGGATTATTGGAAGGACTGAGAAGCAAAGCGAAGAATGGAGATTCACTTCTTAAGTATGCAGAAGCATATCAAACGGCTTCAAACTTGCAAAACATATTTGGTGGGGTTCAGTGCACTCCTGATTTGTCTCAGCAAGATTGCTCTGACTGCTTGAAGACCGCTATCTCTGAACTTCCCAATTGTTGTTTCGCAAAGAGAGGTGGTAGGGTTATCAAACCCAGCTGCAATGTTAGGTATGAGAACTACCGTTTCTTTGGTCCCATGGCTGAGGATTCACCACCGCTGCCGCCGTCTCCTCTTTCCCCTCCAACGACGTCCACCTCAAAAGGGCATAGTAGACAGTCAATCATTACTAGCATTGCCATTGGTAAGCTCCATAATGGAGAAGTTGCTGTCAAAAGGTTATCCAACAATTCTGGGCAAGGAGATATAGAATTTAAGAGTGAAGTAAAGTTGGTGGCTAAGCTTCAGCATCGCAATTTGGCTAGACTCCTTGGTTTCTGTTTGGAAAGAGGAGAAAGACTTCTCATCTATGAGTTTCTTCCCAATAAAAGTCTTGACTACCTGTTATTTGGCAAGTTACAACTTCCTGAGTTGAGATCTATCTACTGTTTCCATAGCAGAGGTAACTTTACAAATTCGAGTACGTACCAAACCAACCTTAACATCGTCCTTTCAGATCTCACTTCCAACACAGCAATTGACTATGGCTTCTACAATTTGTCTCATGGCCAGTATCCTTATAGAGTCAGCGCAATTGGGTTATGTCGAGGAGATATTAAACCAAATGAATGCCGTTCTTGTCTCAAGAATGCCTCAGTTCTTGTCCCTATGTTGTGTCCGAATATGAAGGAGGCTATGGGAGGCTACGACGAATGCTTTCTCCGATACTCAAACCGCTCAATATTTGGGGTCATGGAATCTGACGCTTCATTCATATTGTGGAACAAGTATGATACAACAGATCAGGACAAGTACAACGAAGTGGTTAGTGAGTTGTTGGAAGGACTGAGAAGCAAAGCTAAGAATGGAGATTCACTTCGTAAATATGCAGAAGCAAATCAAGCGGGTCCAAACTTTTACACCATATACGGTGCAGTTCAGTGCACTCCTGATTTGTCTCAGCAAGATTGCTCCGACTGCTTGAAGACGGCTATCTCTGAACTTCCCGGTTGTTGTTTCACAAAGAGAGGTGGCAGGGTTATCAAACCCAGCTGCAACGTCAGGTACGAGAACTACCGTTTCTTTGGTCCTGTGGCTGAGCATTCACCACTGCCGCCGCCGTCTCCTATTTCCCCTCCGAGGACACCCACCTCAAAAGGGCATAGCCGAAAATCAATCAAGACTATCATTGCCATAGTTTTGCCAACTGTTGCAACCATCTTACTGCTCATCTCTGTCTTCAGTATTATTTGTTTGAGAATGAGGAAAACCAGGGACGCAATTCAGAAGGAAGCAGAACTTGATGATGAAACTGAATTTATTGAGTCATTACAGTTAGATTTTGAAACCATCAGAACTGCAACAGATAATTTCTCTGATGCAAATAAACTTGGACAAGGTGGATTTGGACCAGTTTATAAGGGTAAGCTCCATAATGGAGAAGAAGTTGCTGTCAAAAGGTTATCCAAGAATTCTGGGCAAGGAGACATAGAATTTAAGAATGAAGTAAAGTTGATGGCTAAGCTTCAGCATCGCAATTTAGCTAGACTCCGTGGCTTCTGTTTGGAAAGAGAAGAAAGACTTCTCATCTATGAGTTTCTTCCCAATAAAAGTCTTGACTACTTATTATTTGATCCAAATCATCGTGCTCAACTGAATTGGGAGATGCGTCACAAAATTATCATGGGCGTAGCTCGTGGCCTTCATTATCTCCATCAAGATTCCCAGCTACGAATTATTCATCGTGATCTCAAAGCAAGTAATATTCTTTTAGATGCAGAGTTGAATCCCAAGATATCTGATTTTGGCATGGCAAGATTATTTGCTATGGATCAATCTCAAAGTAACACTAGTAGAATTGTTGGAACTTATGGATATATGGCTCCAGAGTATGCAATGCGTGGGCAATTCTCAATCAAATCAGATGTCTTTAGTTTCGGTGTGCTAATCCTAGAGATTATATGTGGGAAGAAAAACAACAGCATCTTTCATGAAGAGAATATACTGAATCTACTGAGCTTTGTATGGAAAAACTGGAGAGAAGGGACAACCTCAAATATAGTAGATCCTGTATTAAACAATGCGTCAAGCAATGAAATAAAGAGATGCATCCATATTGGGTTGCTATGCGTTCAGGAAAATGTAGCTGATAGGCCAACCATGGCTTCAGTTGCTCTAATGCTTGATAGCCACTCTATAACTCTCTCAGTACCATCCGAACCTCCATTTTTAATGTATAACAGAAGCTTACCAGAAACGAATTCTGGGGAGAATAATTCATCAGGGGCCACAAGATCAGCTGAAGGAGGAAGAGACTATGTTGAAGCCTCAACAAATGAAGTCACAATAACTGAGCTTCATCCTCGCTAA 2814 0.4204 MTEVTLQIQHPDRVSTIGLCRGDITPDECHACLKNASLILPMSCPNMREAMAGSDECFLRQSNCSIFRVMESNASCIWWNRYDTAEQDKYNEVSGLLEGLRSKAKNGDSLLKYAEAYQTASNLQNIFGGVQCTPDLSQQDCSDCLKTAISELPNCCFAKRGGRVIKPSCNVRYENYRFFGPMAEDSPPLPPSPLSPPTTSTSKGHSRQSIITSIAIGKLHNGEVAVKRLSNNSGQGDIEFKSEVKLVAKLQHRNLARLLGFCLERGERLLIYEFLPNKSLDYLLFGKLQLPELRSIYCFHSRGNFTNSSTYQTNLNIVLSDLTSNTAIDYGFYNLSHGQYPYRVSAIGLCRGDIKPNECRSCLKNASVLVPMLCPNMKEAMGGYDECFLRYSNRSIFGVMESDASFILWNKYDTTDQDKYNEVVSELLEGLRSKAKNGDSLRKYAEANQAGPNFYTIYGAVQCTPDLSQQDCSDCLKTAISELPGCCFTKRGGRVIKPSCNVRYENYRFFGPVAEHSPLPPPSPISPPRTPTSKGHSRKSIKTIIAIVLPTVATILLLISVFSIICLRMRKTRDAIQKEAELDDETEFIESLQLDFETIRTATDNFSDANKLGQGGFGPVYKGKLHNGEEVAVKRLSKNSGQGDIEFKNEVKLMAKLQHRNLARLRGFCLEREERLLIYEFLPNKSLDYLLFDPNHRAQLNWEMRHKIIMGVARGLHYLHQDSQLRIIHRDLKASNILLDAELNPKISDFGMARLFAMDQSQSNTSRIVGTYGYMAPEYAMRGQFSIKSDVFSFGVLILEIICGKKNNSIFHEENILNLLSFVWKNWREGTTSNIVDPVLNNASSNEIKRCIHIGLLCVQENVADRPTMASVALMLDSHSITLSVPSEPPFLMYNRSLPETNSGENNSSGATRSAEGGRDYVEASTNEVTITELHPR 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1688g00020 937 MobiDBLite consensus disorder prediction 896 937 - -
Pral1688g00020 937 FunFam cysteine-rich receptor-like protein kinase 10 682 883 - -
Pral1688g00020 937 Gene3D Phosphorylase Kinase; domain 1 199 274 - -
Pral1688g00020 937 ProSiteProfiles Gnk2-homologous domain profile. 71 178 IPR002902 -
Pral1688g00020 937 MobiDBLite consensus disorder prediction 184 206 - -
Pral1688g00020 937 Gene3D Phosphorylase Kinase; domain 1 568 681 - -
Pral1688g00020 937 ProSiteProfiles Gnk2-homologous domain profile. 293 396 IPR002902 -
Pral1688g00020 937 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 291 396 - -
Pral1688g00020 937 ProSiteProfiles Protein kinase domain profile. 606 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00020 937 Gene3D Transferase(Phosphotransferase) domain 1 682 884 - -
Pral1688g00020 937 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 294 936 - -
Pral1688g00020 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 727 739 IPR008271 GO:0004672|GO:0006468
Pral1688g00020 937 FunFam Cysteine-rich receptor-like protein kinase 10 568 681 - -
Pral1688g00020 937 Gene3D - 293 395 IPR038408 -
Pral1688g00020 937 Gene3D - 402 509 IPR038408 -
Pral1688g00020 937 Gene3D - 2 65 IPR038408 -
Pral1688g00020 937 Gene3D - 73 178 IPR038408 -
Pral1688g00020 937 FunFam Cysteine-rich receptor-like protein kinase 10 74 178 - -
Pral1688g00020 937 ProSiteProfiles Gnk2-homologous domain profile. 1 66 IPR002902 -
Pral1688g00020 937 SUPERFAMILY Protein kinase-like (PK-like) 591 901 IPR011009 -
Pral1688g00020 937 ProSiteProfiles Gnk2-homologous domain profile. 402 509 IPR002902 -
Pral1688g00020 937 MobiDBLite consensus disorder prediction 896 914 - -
Pral1688g00020 937 Pfam Salt stress response/antifungal 90 176 IPR002902 -
Pral1688g00020 937 Pfam Salt stress response/antifungal 412 507 IPR002902 -
Pral1688g00020 937 Pfam Salt stress response/antifungal 298 393 IPR002902 -
Pral1688g00020 937 Pfam Salt stress response/antifungal 9 63 IPR002902 -
Pral1688g00020 937 FunFam Cysteine-rich receptor-like protein kinase 10 404 509 - -
Pral1688g00020 937 MobiDBLite consensus disorder prediction 518 537 - -
Pral1688g00020 937 SMART serkin_6 606 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00020 937 SUPERFAMILY Protein kinase-like (PK-like) 219 296 IPR011009 -
Pral1688g00020 937 Pfam Protein tyrosine and serine/threonine kinase 610 872 IPR001245 GO:0004672|GO:0006468
Pral1688g00020 937 Pfam Protein tyrosine and serine/threonine kinase 219 287 IPR001245 GO:0004672|GO:0006468
Pral1688g00020 937 CDD STKc_IRAK 612 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1688g00020 Pral-Chr1688 267922 280788 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1688g00020 302 937 Receptor kinase-like Gene Family AT4G21410 49.238 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1688g00020 PK_Tyr_Ser-Thr 7.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1688g00020 - - lang:109353867 794.653