Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1688g00018 ATGTCTTCCATTATTCCTTTGATTCTGCTTTGGTTCCTTTCTCATCTTACCACTCTCACCGCTGAGCCTCCCGACTTGAGATATAAACGCTGCTTCGATTCAAGAGGTAGCTACACAAAACCAAGTACCTACCGAACCAACCTTAACATCCTCCTCTCAGATCTCACTTCCAACACACAAAATGACTACGGTTTCTACAATCTGTCTTATGGCCAAAACCCTGACACAGTAAGCGCCATTGGGTTATGCAGAGGAGATGTTAAACCAAACAAATGCCGATCTTGTCTCAAGAACGCCTCCATTCTTATCCCCAAGTCTTGCCCAGATCTGAAGGAGGCAATGGGAGGCTACGATGAATGCTTCCTACGATACTCGAACCGACCAATATTGGGTGTCATGGAATACGATGTTTGGATCAGTTTGCCGAACCAACAAAATGCTACAGAACCGGGCGAGTACTATGAAGCGGCTAAGGAGTTATTGGATGGAATGAATGGTAAACTAACTGCCAACAGAGTTTCATCTGTTCGTAAGTATGAAGCAGCAAATAAATCGGGTCCAAATTCGCAGACTGTGTTTGGTGTAGTTCAGTGCACTCCTGATTTAACTGAGGGACGTTGTTCAGACTGTTTGGCGCAGGCGATCGACCAAATCCTGCCATGTTGTTATACAAACACAGGTGGTCGGGTTATTATGCCGAGCTGCAATATTAGGTATGAGAATTACCGTTTCTTTGATCTTGTGTCTGAGGATTCCCCACCACTGTCTCCTCTTTCTCCTTCAAAAGCCCCCAGCTCATCAAAAGGGAATAATAAAATATCAAGAACTACCATTGCTGTATTGGGGCCAATTGTTGCAATGATCTTACTGTTCATTTCTATCTTCATTTATTTTAGATTGAAGAAACCTAAAGAAACATATCAAGCTGATGCTGAACTTCATCGTGAAATTATACTTTCTGAACCATTGCTATTAGACTTTGAAAGCATCAAAACTGCAACCGATAATTTCTCTGACGCAAATAAACTTGGGCAAGGTGGATTTGGACCTGTTTATAAGGGTAAGCTCTATAACGGAGAAGAAGTGGCAATCAAAAGGCTGTCCAGGAATTCTAGGCAAGGAGATAGAGAATTTAAAAATGAAGTGATGTTGTTGGCCAAGCTTAAACATCGCAATTTGGTGAGACTCATTGGCTTTTGTTTGGAAAGAGGAGAGAGACTACTCATGTATGAGTTTCTTCCCAATAAAAGTCTTGACTACTTATTATTTGATCCAAATCACCAAGCGCAACTGAATTGGGTGACACGTCACAAAATTATCGAAGGTGTAGCTCGTGGTATCCATTATCTTCATGAGGATTCCCGACTACGAATTATTCATCGTGATCTCAAAGCAAGTAATATTCTTTTAGATGGGGAGTTTAATCCCAAGATATCAGATTTTGGCATGGCTAGATTATTTGCTATGGATCAAACTCAATGTGATACTAGTAGAATTGTTGGAACCTATGGTTATATGGCCCCAGAATATGCAATGCACGGACAATTTTCAGTTAAATCAGATGTTTATAGCTTTGGTATACTAATCCTAGAGATTGTTAGTGGGAAGAAAAACAGTAGCTACTTTCATGAAGAGCATGGACTGGATCTGCTAGGCTTTGCATGGAAAAATTGGAGGGACGGAACAGCCTCAAGGATAATAGATCCAGTACTAAACAATAGTTCAACAAATGAAATAATGAGATGCATCCACATTGGGTTACTTTGTGTACAAGAAAATATAGCTGATAGGCCAACCATGGCGTCCGTTACATCGATGCTTAGCAGCTACTCATTTTCTCTCCGATTACCATCACAGCCTCCATTTTTAATTAGTAGCACAAGCTCATCAGAGAAGAACTTTCACGAGAACAGTTCATCAGGGGCAACAAGATCAACTAAAGGAGGAAGGAATAACTATGCTGAATCCTCAACAAATGAAGTCTCTGTTACTGAGATTTATCCTCGCTGA 2010 0.409 MSSIIPLILLWFLSHLTTLTAEPPDLRYKRCFDSRGSYTKPSTYRTNLNILLSDLTSNTQNDYGFYNLSYGQNPDTVSAIGLCRGDVKPNKCRSCLKNASILIPKSCPDLKEAMGGYDECFLRYSNRPILGVMEYDVWISLPNQQNATEPGEYYEAAKELLDGMNGKLTANRVSSVRKYEAANKSGPNSQTVFGVVQCTPDLTEGRCSDCLAQAIDQILPCCYTNTGGRVIMPSCNIRYENYRFFDLVSEDSPPLSPLSPSKAPSSSKGNNKISRTTIAVLGPIVAMILLFISIFIYFRLKKPKETYQADAELHREIILSEPLLLDFESIKTATDNFSDANKLGQGGFGPVYKGKLYNGEEVAIKRLSRNSRQGDREFKNEVMLLAKLKHRNLVRLIGFCLERGERLLMYEFLPNKSLDYLLFDPNHQAQLNWVTRHKIIEGVARGIHYLHEDSRLRIIHRDLKASNILLDGEFNPKISDFGMARLFAMDQTQCDTSRIVGTYGYMAPEYAMHGQFSVKSDVYSFGILILEIVSGKKNSSYFHEEHGLDLLGFAWKNWRDGTASRIIDPVLNNSSTNEIMRCIHIGLLCVQENIADRPTMASVTSMLSSYSFSLRLPSQPPFLISSTSSSEKNFHENSSSGATRSTKGGRNNYAESSTNEVSVTEIYPR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1688g00018 669 Gene3D - 25 128 IPR038408 -
Pral1688g00018 669 Gene3D - 136 244 IPR038408 -
Pral1688g00018 669 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Pral1688g00018 669 Gene3D Phosphorylase Kinase; domain 1 300 412 - -
Pral1688g00018 669 ProSiteProfiles Protein kinase domain profile. 337 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00018 669 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Pral1688g00018 669 FunFam Cysteine-rich receptor-like protein kinase 10 138 244 - -
Pral1688g00018 669 SMART serkin_6 337 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00018 669 Pfam Protein tyrosine and serine/threonine kinase 341 606 IPR001245 GO:0004672|GO:0006468
Pral1688g00018 669 Gene3D Transferase(Phosphotransferase) domain 1 413 615 - -
Pral1688g00018 669 ProSiteProfiles Gnk2-homologous domain profile. 135 244 IPR002902 -
Pral1688g00018 669 CDD STKc_IRAK 343 607 - -
Pral1688g00018 669 Pfam Salt stress response/antifungal 145 242 IPR002902 -
Pral1688g00018 669 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Pral1688g00018 669 FunFam Cysteine-rich receptor-like protein kinase 10 300 412 - -
Pral1688g00018 669 FunFam cysteine-rich receptor-like protein kinase 10 413 614 - -
Pral1688g00018 669 SUPERFAMILY Protein kinase-like (PK-like) 319 607 IPR011009 -
Pral1688g00018 669 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 665 - -
Pral1688g00018 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Pral1688g00018 669 MobiDBLite consensus disorder prediction 627 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1688g00018 Pral-Chr1688 260130 263709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1688g00018 31 669 Receptor kinase-like Gene Family AT4G21410 46.445 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1688g00018 PK_Tyr_Ser-Thr 8.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1688g00018 - - qsa:O6P43_031179 751.51