Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1688g00017 ATGTCTTCCATTATTCCTTTGATTCTGCTTTGGTTCCTTTCTCATCTTACCACTCTCACCGCTGAGCCTCCCGACTTGAGATATAAACGCTGCTTCGATTCAAGAGGTAGCTACACAAAACCAAGTACCTACCGAACCAACCTTAACATCCTCCTCTCAGATCTCACTTCCAACACACAAAATGACTACGGTTTCTACAATCTGTCTTATGGCCAAAACCCTGACACAGTAAGCGCCATTGGGTTATGCAGAGGAGATGTTAAACCAAACAAATGCCGATCTTGTCTCAAGAACGCCTCCATTCTTATCCCCAAGTCTTGCCCAGATCTGAAGGAGGCAATGGGAGGCTACGATGAATGCTTCCTACGATACTCGAACCGACCAATATTGGGTGTCATGGAATACGATGTTTGGATCAGTTTGCCGAACCAACAAAATGCTACAGAACCGGGCGAGTACTATGAAGCGGCTAAGGAGTTATTGGATGGAATGAATGGTAAACTAACTGCCAACAGAGTTTCATCTGTTCGTAAGTATGAAGCAGCAAATAAATCGGGTCCAAATTCGCAGACTGTGTTTGGTGTAGTTCAGTGCACTCCTGATTTAACTGAGGGACGTTGTTCAGACTGTTTGGCGCAGGCGATCGACCAAATCCTGCCATGTTGTTATACAAACACAGGTGGTCGGGTTATTATGCCGAGCTGCAATATTAGGTATGAGAATTACCGTTTCTTTGATCTTGTGTCTGAGGATTCCCCACCACTGTCTCCTCTTTCTCCTTCAAAAGCCCCCAGCTCATCAAAAGGGAATAATAAAATATCAAGAACTACCATTGCTGTATTGGGGCCAATTGTTGCAATGATCTTACTGTTCATTTCTATCTTCATTTATTTTAGATTGAAGAAACCTAAAGAAACATATCAAGCTGATGCTGAACTTCATCGTGAAATTATACTTTCTGAACCATTGCTATTAGACTTTGAAAGCATCAAAACTGCAACCGATAATTTCTCTGACGCAAATAAACTTGGGCAAGGTGGATTTGGACCTGTTTATAAGGGTAAGCTCTATAACGGAGAAGAAGTGGCAATCAAAAGGCTGTCCAGGAATTCTAGGCAAGGAGATAGAGAATTTAAAAATGAAGTGATGTTGTTGGCCAAGCTTAAACATCGCAATTTGGTGAGACTCATTGGCTTTTGTTTGGAAAGAGGAGAGAGACTACTCATGTATGAGTTTCTTCCCAATAAAAGTCTTGACTACTTATTATTTGTTGTAGATCCAAATCACCAAGCGCAACTGAATTGGGTGACACGTCACAAAATTATCGAAGGTGTAGCTCGTGGTATCCATTATCTTCATGAGGATTCCCGACTACGAATTATTCATCGTGATCTCAAAGCAAGTAATATTCTTTTAGATGGGGAGTTTAATCCCAAGATATCAGATTTTGGCATGGCTAGATTATTTGCTATGGATCAAACTCAATGTGATACTAGTAGAATTGTTGGAACCTATGGTTATATGGCCCCAGAATATGCAATGCACGGACAATTTTCAGTTAAATCAGATGTTTATAGCTTTGGTATACTAATCCTAGAGATTGTTAGTGGGAAGAAAAACAGTAGCTACTTTCATGAAGAGCATGGACTGGATCTGCTAGGCTTTGCATGGAAAAATTGGAGGGACGGAACAGCCTCAAGGATAATAGATCCAGTACTAAACAATAGTTCAACAAATGAAATAATGAGATGCATCCACATTGGGTTACTTTGTGTACAAGAAAATATAGCTGATAGGCCAACCATGGCGTCCGTTACATCGATGCTTAGCAGCTACTCATTTTCTCTCCGATTACCATCACAGCCTCCATTTTTAATTAGTAGCACAAGCTCATCAGAGAAGAACTTTCACGAGAACAGTTCATCAGGGGCAACAAGATCAACTAAAGGAGGAAGGAATAACTATGCTGAATCCTCAACAAATGAAGTCTCTGTTACTGAGATTTATCCTCGCTGA 2016 0.4087 MSSIIPLILLWFLSHLTTLTAEPPDLRYKRCFDSRGSYTKPSTYRTNLNILLSDLTSNTQNDYGFYNLSYGQNPDTVSAIGLCRGDVKPNKCRSCLKNASILIPKSCPDLKEAMGGYDECFLRYSNRPILGVMEYDVWISLPNQQNATEPGEYYEAAKELLDGMNGKLTANRVSSVRKYEAANKSGPNSQTVFGVVQCTPDLTEGRCSDCLAQAIDQILPCCYTNTGGRVIMPSCNIRYENYRFFDLVSEDSPPLSPLSPSKAPSSSKGNNKISRTTIAVLGPIVAMILLFISIFIYFRLKKPKETYQADAELHREIILSEPLLLDFESIKTATDNFSDANKLGQGGFGPVYKGKLYNGEEVAIKRLSRNSRQGDREFKNEVMLLAKLKHRNLVRLIGFCLERGERLLMYEFLPNKSLDYLLFVVDPNHQAQLNWVTRHKIIEGVARGIHYLHEDSRLRIIHRDLKASNILLDGEFNPKISDFGMARLFAMDQTQCDTSRIVGTYGYMAPEYAMHGQFSVKSDVYSFGILILEIVSGKKNSSYFHEEHGLDLLGFAWKNWRDGTASRIIDPVLNNSSTNEIMRCIHIGLLCVQENIADRPTMASVTSMLSSYSFSLRLPSQPPFLISSTSSSEKNFHENSSSGATRSTKGGRNNYAESSTNEVSVTEIYPR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1688g00017 671 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Pral1688g00017 671 ProSiteProfiles Protein kinase domain profile. 337 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00017 671 Gene3D Phosphorylase Kinase; domain 1 300 412 - -
Pral1688g00017 671 SMART serkin_6 337 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00017 671 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Pral1688g00017 671 FunFam Cysteine-rich receptor-like protein kinase 10 138 244 - -
Pral1688g00017 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Pral1688g00017 671 FunFam cysteine-rich receptor-like protein kinase 10 413 616 - -
Pral1688g00017 671 MobiDBLite consensus disorder prediction 629 671 - -
Pral1688g00017 671 ProSiteProfiles Gnk2-homologous domain profile. 135 244 IPR002902 -
Pral1688g00017 671 Pfam Salt stress response/antifungal 145 242 IPR002902 -
Pral1688g00017 671 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Pral1688g00017 671 FunFam Cysteine-rich receptor-like protein kinase 10 300 412 - -
Pral1688g00017 671 CDD STKc_IRAK 343 609 - -
Pral1688g00017 671 SUPERFAMILY Protein kinase-like (PK-like) 319 609 IPR011009 -
Pral1688g00017 671 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 667 - -
Pral1688g00017 671 Gene3D Transferase(Phosphotransferase) domain 1 413 617 - -
Pral1688g00017 671 Gene3D - 25 128 IPR038408 -
Pral1688g00017 671 Gene3D - 136 244 IPR038408 -
Pral1688g00017 671 Pfam Protein tyrosine and serine/threonine kinase 341 608 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1688g00017 Pral-Chr1688 260130 263709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1688g00017 31 671 Receptor kinase-like Gene Family AT4G21410 46.305 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1688g00017 PK_Tyr_Ser-Thr 4.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1688g00017 - - qsa:O6P43_031179 746.503