Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1688g00014 ATGACGCTGATTGCCAATAATCTTCTGGTTCTTCTATCATTCTTTTGCCATCTTCTTATTCTCACCGCCCAGCAGGACCGACCTTATGTTAATCAAACCTGTTTCAATGGCAAAGGAACGTACACAAACAAAAGTGCCTATCATACCAACCTCAAAACCCTTCTTTCCAATTCCACCTCCAACACAAAAGATGACTATGGCTTCTACAATTCCTCGTACGGCCAAAACCCCGACATAGTTTACACATCTGCACTCTGCAAAGGAGACCTTATGCCAGATGTTTGTCGCAGTTGCCTCAGACCTGATTTTTACGATGCAATTCATAATCCAAATAATGTAGCAGATGCCGACCAGTACACAGATGTGCTTGATCAGCTAATGCAAGCTCTTAAGACCAAAGCTGCAGCTGGTGGTCCTTGTCGCAAGGTGGCTGTTGGATACGCCTCAGCGACGTTTCAATATGTACACCGTCTTGCTCAGTGCACGCCTGATTTGACCGAGCAAAACTGCGAGGCTTGCTTGGAAAAGGCGATATCAGATATCCCAATTTGCTGTCAGAACAAGGTTGGAGGCAGGGTTATCAAACGGAACTGCAATCTCAGATTCAAGAAGAACCGGTTCTATGATCGTAATGTTGTTGATCCAATACAAGTATCTGCATCTCCTCCTCCTCCTTCCACTACTACTCCGTCACAAGGACCCGTCGGTTCACCCAACGTTCCATCTACCAGAGAAGATGAAGCTGAAATAATGGATGACGAAGGCATTAAACCAGCTGATGATTCGTTGCAATTTGACTTTGAAACCGTTAGACTCGCTACAGATAACTTCTCTGTTGCAAATAAACTTGGACAAGGAGGATTTGGGCTAGTATATAAGGGTAGGCTCCGTAATGGACACGAAGTTGTTGTCAAAAGGCTGTCCATGGATTCCGGGCAAGGAGACTTGGAATTCAAAAACGAAGTGTTATTGATGGCCAAACTTCAACATCGCAATTTAGGAAGATTAGTTGGTTTTTGTTTAGAAGGAACTGAAAGGCTACAAAATGAGTTTCTCCCCAATAGAAGTCTTGATTACATGTTATTCGATCCAATTTAACGAACACATTTGCATTGGGAAGTGAGTTACAAAATTATAGTCGGCATTGCTCGTGGCATTCTTTACCTACACAAAGATTCAAGATTATGCATTATTCACCGTGACCTTAAAGCAAGTAATATTCTTCTAGATAAATATCTAAATCCAAAAATAGCAGATTTTGGCATGGTGAGGTTATTTGCTTTAGATCAAACTCATAACACTACAAGCAAAGTTGTTGGAACTTATGGATACATGGCATCAGAATATGCAATACATGGACAAATATCAACAAAATTAGATGTCTTTAGTTTTGGTATACTGGCTCTTGAAATTATAAGTGGCCAAAAGAATAGTAGCATGATTGATGAGGAGGATATACAAGATCTTTTAAGCTTTGTATGGAAAATCTGGAGGGAAGGGACAACCTCAAATATAGTAGAACCTGTGATAAGTAATAGTTCAAGGGATGAAATAATGAGATGCATTCACATCGCATTACTATGTGTTCAAGAAAAGGTAGCAGATAGGCCTACCATGGCTTCCATTGAACTTATGCTAAACAGCTACTCTTCGTCTATCCCTTTACCTTCACGGCCTCCATGCTTTATGAATTTCAGCAGCACGCTTGAGATGCAAACTAGAGAGGAAGATAAAGGAGAGGGAGTACATAACTCTGCTCAACAAGCATAA 1770 0.4102 MTLIANNLLVLLSFFCHLLILTAQQDRPYVNQTCFNGKGTYTNKSAYHTNLKTLLSNSTSNTKDDYGFYNSSYGQNPDIVYTSALCKGDLMPDVCRSCLRPDFYDAIHNPNNVADADQYTDVLDQLMQALKTKAAAGGPCRKVAVGYASATFQYVHRLAQCTPDLTEQNCEACLEKAISDIPICCQNKVGGRVIKRNCNLRFKKNRFYDRNVVDPIQVSASPPPPSTTTPSQGPVGSPNVPSTREDEAEIMDDEGIKPADDSLQFDFETVRLATDNFSVANKLGQGGFGLVYKGRLRNGHEVVVKRLSMDSGQGDLEFKNEVLLMAKLQHRNLGRLVGFCLEGTERLLXNEFLPNRSLDYMLFDPIXRTHLHWEVSYKIIVGIARGILYLHKDSRLCIIHRDLKASNILLDKYLNPKIADFGMVRLFALDQTHNTTSKVVGTYGYMASEYAIHGQISTKLDVFSFGILALEIISGQKNSSMIDEEDIQDLLSFVWKIWREGTTSNIVEPVISNSSRDEIMRCIHIALLCVQEKVADRPTMASIELMLNSYSSSIPLPSRPPCFMNFSSTLEMQTREEDKGEGVHNSAQQA 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1688g00014 590 MobiDBLite consensus disorder prediction 571 590 - -
Pral1688g00014 590 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 73 568 - -
Pral1688g00014 590 Pfam Protein kinase domain 278 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00014 590 SUPERFAMILY Protein kinase-like (PK-like) 265 571 IPR011009 -
Pral1688g00014 590 Pfam Salt stress response/antifungal 112 204 IPR002902 -
Pral1688g00014 590 Pfam Salt stress response/antifungal 34 101 IPR002902 -
Pral1688g00014 590 ProSitePatterns Protein kinases ATP-binding region signature. 283 305 IPR017441 GO:0005524
Pral1688g00014 590 ProSiteProfiles Gnk2-homologous domain profile. 101 207 IPR002902 -
Pral1688g00014 590 Gene3D Phosphorylase Kinase; domain 1 253 352 - -
Pral1688g00014 590 ProSiteProfiles Protein kinase domain profile. 277 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00014 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Pral1688g00014 590 Gene3D Transferase(Phosphotransferase) domain 1 353 554 - -
Pral1688g00014 590 FunFam Cysteine-rich receptor-like protein kinase 28 353 555 - -
Pral1688g00014 590 Gene3D - 105 207 IPR038408 -
Pral1688g00014 590 Gene3D - 27 104 IPR038408 -
Pral1688g00014 590 FunFam Cysteine-rich receptor-like protein kinase 10 240 352 - -
Pral1688g00014 590 FunFam Cysteine-rich receptor-like protein kinase 10 103 207 - -
Pral1688g00014 590 MobiDBLite consensus disorder prediction 214 259 - -
Pral1688g00014 590 SMART serkin_6 277 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1688g00014 Pral-Chr1688 242388 246551 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1688g00014 30 563 Receptor kinase-like Gene Family AT4G38830 43.421 1.06e-158 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1688g00014 Pkinase 3.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1688g00014 - - vvi:100241634 596.275