Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1688g00013 ATGTCTATCATTTCTTTAACTCTGCTTTCTTTCCTTTATCTCATCATTCCCACCACCCAATTTAACCAGCTTGACTTCAACAAATTCATATATTACAATTGCTCCATTAAAAGTGGAAACACCTATACAGAGACAAGCAACTACCACTCCAACCTCGATACGCTCCTTTCCAATCTCACTTCCAACACAAAAATTGACTATGGCTTCTACAATTCTTCTTATGGCCAAAACCCTGACACAGTTTATGTAATCGGACTCTGCAGGGGAGATTTGAATCCAAATTTCTGCCGTTATTGCCTCAACAGCGCCACAATACTTCTCCCAAATAAATGTCCGAATCAGAAGGAGGCAATGGGATATAACGACGGATGCATTGTACGATACTCGGATCAGCAAATATTTGGGTCATATGGAAACCCTGAATTTTCCTTTCCATATTTCGACCCTACAAATGCAACAGATACGAACTTCAATGCAACGCTTAATGATCTTTTGCAAAAACTAGCAAAAAAAGCGGCGGCTGGTGACTCTCGTCATAAGTTTGCAGCATTAAATGTAGAGCACATGTATAAAAAAGATCTATATGGTCTTGCTCAATGCACGCCGGACTTATCTGAGCAAGATTGTGGTAAATGCTTGAAGAAGGCAATCATGGAACTCAATCATTGTTGTAATGACAAGATTGGTGCAAGGATTATTAAACTTAGCTGCAATGTTAGATACGAGGACTACTTGTTCTATGATAAAAACGTGGTCGACTCATTGCAACCATCTCCTCCTCCACCAGCTAGCAATCACAGAGGGTTAAGGGTCTGGCCGTGCGAACTTGCGACAGATAACTTTTCTGTTGAAAATAAGCTTGGAGAGGGAGGATTTGGGCCAGTGTATAAGGGTAGGCTCTCCAGTGGAAGAGAAATAGCTGTTAAAAGGCTGTCCATGGATTCTGGGCAAGGAGATTCAGAATTTAAGAATGAAGTATCGTTGGTGGCCAAGCTTCAACACCGCAATTTAGTGAAATTACTTGGTTTCAGTTTAGAAAGAAAAGAAAGGTTACTTGTCTATGAGTTTCTTCCCAATAAAAGTCTTGACTACTTGCTATTTGATCCTATCAAACGAACTCATCTGGATTGGGAGACACGATACAAAATCATAGGCGGCATTGGTCGTGGCATTCTTTATCTTCATGAGGATTCAAGATTACGTATTATTCATCGTGATCTCAAAGCAAGTAACATTCTTTTAGATGAAGAGATGAATCCTAAAATATCAGATTTTGGTATGGCAAAACTCTTCTCCATAAATCAAACCCAAAGCAATACGAGCAGAATTGTTGGAACCTACGGATATATGGCACCAGAATATGCAATGCATGGACAATTTTCAATCAAATCAGATGTTTTTAGTTTTGGTGTATTGGTTTTAGAGATTGTAAGCGGAAAGAGAAACAATACCAACTTTCATGAGGAGAAAGCCCATGATCTATTAAGCTTTGCATGGAAAAATTGGAGGGAAGGGACAGCCTCAAATACAATAGATTCATTATTAATTGATGGGTCAAGAAAGGAAATGATAAGATGCATCCACATTGGTTTACTCTGCGTTCAAGAAGATATAGCGGACAGGCCTACCATGGCTAACGTTGCACTTATGCTCAGCAGCCACTCATTCTCTCTCCCGTTACCTTCACAACCTGCATTTTTAAAGAATTACAGAACTTTGGCAGAGCAGCATTGTTCAGGGGAGAGTAGTTCAGGAACAACAAGATCCACTGAACGAGACGCTACTAGCTCCATCCAGGCTTCAAGTGGACGAGAATGTAACTCTGTTCAGGAATAA 1836 0.4009 MSIISLTLLSFLYLIIPTTQFNQLDFNKFIYYNCSIKSGNTYTETSNYHSNLDTLLSNLTSNTKIDYGFYNSSYGQNPDTVYVIGLCRGDLNPNFCRYCLNSATILLPNKCPNQKEAMGYNDGCIVRYSDQQIFGSYGNPEFSFPYFDPTNATDTNFNATLNDLLQKLAKKAAAGDSRHKFAALNVEHMYKKDLYGLAQCTPDLSEQDCGKCLKKAIMELNHCCNDKIGARIIKLSCNVRYEDYLFYDKNVVDSLQPSPPPPASNHRGLRVWPCELATDNFSVENKLGEGGFGPVYKGRLSSGREIAVKRLSMDSGQGDSEFKNEVSLVAKLQHRNLVKLLGFSLERKERLLVYEFLPNKSLDYLLFDPIKRTHLDWETRYKIIGGIGRGILYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGMAKLFSINQTQSNTSRIVGTYGYMAPEYAMHGQFSIKSDVFSFGVLVLEIVSGKRNNTNFHEEKAHDLLSFAWKNWREGTASNTIDSLLIDGSRKEMIRCIHIGLLCVQEDIADRPTMANVALMLSSHSFSLPLPSQPAFLKNYRTLAEQHCSGESSSGTTRSTERDATSSIQASSGRECNSVQE 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1688g00013 611 FunFam Cysteine-rich receptor-like protein kinase 10 264 356 - -
Pral1688g00013 611 Pfam Salt stress response/antifungal 152 244 IPR002902 -
Pral1688g00013 611 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Pral1688g00013 611 SUPERFAMILY Protein kinase-like (PK-like) 266 573 IPR011009 -
Pral1688g00013 611 Gene3D Transferase(Phosphotransferase) domain 1 357 557 - -
Pral1688g00013 611 Gene3D Phosphorylase Kinase; domain 1 268 356 - -
Pral1688g00013 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Pral1688g00013 611 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Pral1688g00013 611 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 598 - -
Pral1688g00013 611 FunFam Cysteine-rich receptor-like protein kinase 10 144 246 - -
Pral1688g00013 611 ProSiteProfiles Protein kinase domain profile. 281 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00013 611 Pfam Protein kinase domain 282 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00013 611 Gene3D - 26 132 IPR038408 -
Pral1688g00013 611 Gene3D - 145 246 IPR038408 -
Pral1688g00013 611 FunFam cysteine-rich receptor-like protein kinase 10 357 558 - -
Pral1688g00013 611 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Pral1688g00013 611 MobiDBLite consensus disorder prediction 578 611 - -
Pral1688g00013 611 SMART serkin_6 281 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00013 611 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1688g00013 Pral-Chr1688 224781 229814 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1688g00013 41 566 Receptor kinase-like Gene Family AT4G23230 46.296 2.03e-176 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1688g00013 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1688g00013 - - jre:108981718 622.854