Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1688g00010 ATGACTTGCTCTTTCTTACTTGAAGCTACAACAAAGGATGATGATGAAACTAAACCAGCTAAGATTCTGCAAATCGATTATAACACCATCAAGCTCGCAACTGATAACTTCTCTGATGCAAATAAACTTGGACAAGGAGGATTTGGGCCAGTGTATAAAGGTCGGCTTCCCGATGGACAAGAAGTTGCTATGAAAATGTTGTCTAGGCATTCTAGGCAAGGAGATTTAGAATTTAAGACTAAACAAGCTTTTTTGAATTGGATAGTACGATACAAGATTATAAGGGGCATTGCTCGTGGTCTACTTTATCTTCATCAAGATTCAATATTACATATTATCCATCGTGATCTTAAAGCAAGCAATATTCTCTTGGATGATGAATTAAATCCTAAGATATCAAATTTTGGCACTGCGAGACTATTTAAGGCAGATCAAACTCGAAGCAATACTAATAGAATTGTGGCAACCAGTGGTTATATGGCCCCAGAATATGTCCTATACGGTCAATGTTCAGTAAAATCAGATGTATATAGTTTTGGCGTATTGGTTCTAGAGATTATAAGTGGCAAGAAAAACAGCTGCACCTTTCATGTAGAGAATACACAGCATCATCTGGACCTATTAAGTTTTGTATGGAAAAATTGGAAGGAAGGGACAACCTCAAATATAGTAGATCCTGTGATAAGCAATGGTTCAAGAAATGAAATAATGAGATGTATTCACATTGCATTGCTATGCATTCAAGAAAATACAGCTGATCAACCAACTATGGCCTCAGTCTCATTTATGCTGAATAGTTTCTCTTCCTCTCTCCCTGTGCCTTCAAAACGTCGATTTCTTGTGAATTATAGCAGTTCATCTGAGATGATGACTTTGAGACATAATAGTTTAGAGGCCACAAGGGCAAGTGAACGAGGAAGAAACTCTAATCAATCATCATGA 942 0.3705 MTCSFLLEATTKDDDETKPAKILQIDYNTIKLATDNFSDANKLGQGGFGPVYKGRLPDGQEVAMKMLSRHSRQGDLEFKTKQAFLNWIVRYKIIRGIARGLLYLHQDSILHIIHRDLKASNILLDDELNPKISNFGTARLFKADQTRSNTNRIVATSGYMAPEYVLYGQCSVKSDVYSFGVLVLEIISGKKNSCTFHVENTQHHLDLLSFVWKNWKEGTTSNIVDPVISNGSRNEIMRCIHIALLCIQENTADQPTMASVSFMLNSFSSSLPVPSKRRFLVNYSSSSEMMTLRHNSLEATRASERGRNSNQSS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1688g00010 313 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 16 80 - -
Pral1688g00010 313 SUPERFAMILY Protein kinase-like (PK-like) 25 296 IPR011009 -
Pral1688g00010 313 SMART serkin_6 37 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00010 313 Gene3D Transferase(Phosphotransferase) domain 1 94 266 - -
Pral1688g00010 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 112 124 IPR008271 GO:0004672|GO:0006468
Pral1688g00010 313 Gene3D Phosphorylase Kinase; domain 1 6 93 - -
Pral1688g00010 313 FunFam cysteine-rich receptor-like protein kinase 10 72 271 - -
Pral1688g00010 313 Pfam Protein kinase domain 89 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00010 313 ProSiteProfiles Protein kinase domain profile. 1 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1688g00010 Pral-Chr1688 171372 172923 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1688g00010 14 305 Receptor kinase-like Gene Family AT4G21410 47.262 6.08e-102 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1688g00010 Pkinase 3.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1688g00010 - - qsa:O6P43_031179 357.066