Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1688g00008 ATGGGGAAGACCGTGCCAGTGATAACAAAGTCTACCATTTCCTTGGCTCTTGTTTCATTCCTTTCTCATCTTCTCATTCTCTCGGCCGCCCAGCATCCTGACGCTACTGTTTATTCCAATTGTTCATTAGGCAAAGGAACCTACACAAACTCAAGTGTCTTCCACACCAACCTCAATGCCCCTCTTTCTAATGTCGCCTCCGACACAAAAATTGACTATGGCTTCTACAATTCCTCTTACGGTGAAAACCCCAATAGGGTGAACGCAATTGGACTCTGCAGAGGAGATGTGAAGCCTGAAACGTGCCGTAGTTGCCTCAAAAATGCCACAATGATTCTCCCAAAGCAATGTCCGAACCAGGTGGAGGCATTTGGATACTATGACTTGTGCATGTTTCGATACTCAAATCGTTCGATCTTTGGGATTTACCAAGATCATGACTTTTCCTACTCTTTTAACAACCCAGAAAAAGCACAAGATGCAGAAAAGTACACCAAGGCTCTTGATGATCTAATGGAAAGTCTAAAAAGCATAGCCGCAGCTGGTGACTCTCATGTTAAGGTGGCCGTGAGAAGTGCAATAGCTGATCAGAATGAAACTGTATTTGGTCTTGCCCAGTGCACGCCTGATTTGTCTCAGCAAGATTGTGAAGATTGCTTAAGAAAGGCTATCTCAGATATCCCAATCTGTTGTCGGAACAGGATTGGTGGTAGAGTTATCAAATTGAGCTGCAATCTTCGATTTGAAAAGGGCCAATTCTATGATTCAATACAATTATCTCCAATTCCTCCTGCTCATGCTCCGTCTAGCAGAAGAACTTCCTCACCACCTGCAGGAGTTTCTGATTCACCAAAAGCCGCTGCTGATTCGCCCAAAGCTTCCGAAGGAAATAGCGACAGAACCTCAAGAATGGTCGCTATCGTGGCCGTGGGCCAACCTTATGTTAATCAAACCTGTTTCTATGACAAAGGAACCTACACAGACAAAAGTGCCTATCATACCAACCTCAAAACCCTTCTTTCCAATTTCACCTCCAACACAAAAGATGACTATGGCTTCTACAATTCCTCGTACGGCCAAAACCCCGACACAGTTTACGCATCTGGACTCTGCAGAGGAGACCTTACGCCAGATGATTGTCGTAGTTGCCTCAATAATTCTATGAGTCTTCTCCCACAGAAATGTCCAAATCAGAAGGTGGCATTTATATACCATGACTCGTGCAGCTTTCAATATTCAAATAGCTCAATGTTTGGGATATATCAGGACCCTGATTTTTTCTACGCAATTAATAACCCAAGTGATGTAGCAGATGCAGACCAATACACAGTTGCGCTTGATCGGCTAATGCAAGTTCTTAAGACCAATGCTGCAGCTGGTGGCCCTTATCGCAAGGTGGCTGCTGGAAACAACTCAACGCCGTTTCAATATGTATATGGTCTTGCTCAGTGCACGCCTGATTTGACTGAGCAAAATTGCGAGGCTTGCTTGGAAAAAGCGATATCAGATATCCCATTTTGCTGTCAGAACAAGGTTGGAGGTAGGGTTATCAAACGGAATTGCAATCTCAGATTTGAGAAGAACCGGTTCTATAATCCTAATTTTGTTCATACAATACAAGTATCTGCATCTCCTCCTCCTCCTCCTCCTACCACTACTCCGTCACAAGGAAAACACAATAGATCAAGAACCATTATTATTATCGTGGCCGTGGTGATTGGTGCCTCCATCGCCCTTCTCATCTTGATTTTCATCTATTTTGCTGTTAGGAAATCGAAGAAAACCATTGAAAGATATTCTTCGATATCTTTAACTGAAATAATGGATGACGAAGACATTAACCCGGCTGATTCGTTGCAATTTGACTTTGAAACCATCAGACTTGCTACAGATAACTTCTCTATTGCAAATAAACTTGGACAAGGAGGATTTGGGCCAGTATATAAGGGTAGGCTCCGTAATGGACAAGAAGTTGCTGTCAAAAGGTTGTCCATGGATTCAGGGCAAGGAGACTTAGAATTAAAAAACGAAGTGTTGTTGATGGCCAAACTTCAACACCGCAATTTAGTAAGATTAGTTGGTTTCTGTTTAGAAGGAACTGAAAGGCTACTCATTTATGAGTTTCTTCCCAATAGAAGTCTTGATTCCATGTTATTCGATCCAATTCAACAAACTCATTTGCATTGGGAAGTGCGTTACAAAATTATAGTCGGCATTGCTCGTGGCATTCTTTACCTACATGAAGATTCAAGATTACGCATTATTCACCGTGACCTCAAAGCAAGTAATATTCTTCTAGATAAAGATCTAAATCCGAAAATAGCAGATTTTGGCATGGCAAGGCTATTTACTTTAGATCAAACTCATAACACTACAAGCAAAGTTGTTGGAACTTATGGATACATGGCACCAGAATATGCAATACATGGACAAATATCAACAAAATTAGATGTCTTTAGTTTTGGTATACTGGCTCTTGAAATTATAAGTGGCCAAAAGAATAATAGCCTGATTGATGAGGAGGATATACAAGATCTTTTAAGCTTTGTATGGAAAAACTGGAGGGAAGGGACAGCCTCAAATATAGTAGATCCCGTGATCAGCAATGGTTCAAGGGATGAAATAATGAGATGCATTCACATCGCATTATTGTGTGTTCAAGAAAACGTAGCAGATAGGCCTACCATGGCTTCTATTGAACTTATGCTAAATAGCTACTCTTTGTCTCTCCCTTTACCTTCACGGCCTCCATGCTTAATGAATTTTAGCAGCACGCTTGAGATGCAAACCAGAGAGGAAGATGAAGGAGAGGGAGTACATTACTCTACTCAACAAGCATAA 2841 0.4164 MGKTVPVITKSTISLALVSFLSHLLILSAAQHPDATVYSNCSLGKGTYTNSSVFHTNLNAPLSNVASDTKIDYGFYNSSYGENPNRVNAIGLCRGDVKPETCRSCLKNATMILPKQCPNQVEAFGYYDLCMFRYSNRSIFGIYQDHDFSYSFNNPEKAQDAEKYTKALDDLMESLKSIAAAGDSHVKVAVRSAIADQNETVFGLAQCTPDLSQQDCEDCLRKAISDIPICCRNRIGGRVIKLSCNLRFEKGQFYDSIQLSPIPPAHAPSSRRTSSPPAGVSDSPKAAADSPKASEGNSDRTSRMVAIVAVGQPYVNQTCFYDKGTYTDKSAYHTNLKTLLSNFTSNTKDDYGFYNSSYGQNPDTVYASGLCRGDLTPDDCRSCLNNSMSLLPQKCPNQKVAFIYHDSCSFQYSNSSMFGIYQDPDFFYAINNPSDVADADQYTVALDRLMQVLKTNAAAGGPYRKVAAGNNSTPFQYVYGLAQCTPDLTEQNCEACLEKAISDIPFCCQNKVGGRVIKRNCNLRFEKNRFYNPNFVHTIQVSASPPPPPPTTTPSQGKHNRSRTIIIIVAVVIGASIALLILIFIYFAVRKSKKTIERYSSISLTEIMDDEDINPADSLQFDFETIRLATDNFSIANKLGQGGFGPVYKGRLRNGQEVAVKRLSMDSGQGDLELKNEVLLMAKLQHRNLVRLVGFCLEGTERLLIYEFLPNRSLDSMLFDPIQQTHLHWEVRYKIIVGIARGILYLHEDSRLRIIHRDLKASNILLDKDLNPKIADFGMARLFTLDQTHNTTSKVVGTYGYMAPEYAIHGQISTKLDVFSFGILALEIISGQKNNSLIDEEDIQDLLSFVWKNWREGTASNIVDPVISNGSRDEIMRCIHIALLCVQENVADRPTMASIELMLNSYSLSLPLPSRPPCLMNFSSTLEMQTREEDEGEGVHYSTQQA 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1688g00008 946 ProSiteProfiles Gnk2-homologous domain profile. 36 139 IPR002902 -
Pral1688g00008 946 ProSiteProfiles Gnk2-homologous domain profile. 424 530 IPR002902 -
Pral1688g00008 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 754 766 IPR008271 GO:0004672|GO:0006468
Pral1688g00008 946 Gene3D Transferase(Phosphotransferase) domain 1 709 909 - -
Pral1688g00008 946 ProSiteProfiles Gnk2-homologous domain profile. 146 253 IPR002902 -
Pral1688g00008 946 ProSiteProfiles Gnk2-homologous domain profile. 314 417 IPR002902 -
Pral1688g00008 946 ProSiteProfiles Protein kinase domain profile. 633 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00008 946 Pfam Protein kinase domain 635 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00008 946 FunFam Cysteine-rich receptor-like protein kinase 10 593 708 - -
Pral1688g00008 946 SUPERFAMILY Protein kinase-like (PK-like) 621 928 IPR011009 -
Pral1688g00008 946 CDD STKc_IRAK 639 904 - -
Pral1688g00008 946 MobiDBLite consensus disorder prediction 259 300 - -
Pral1688g00008 946 Gene3D - 34 138 IPR038408 -
Pral1688g00008 946 Gene3D - 145 253 IPR038408 -
Pral1688g00008 946 Gene3D - 313 417 IPR038408 -
Pral1688g00008 946 Gene3D - 423 530 IPR038408 -
Pral1688g00008 946 FunFam Cysteine-rich receptor-like protein kinase 10 148 253 - -
Pral1688g00008 946 Pfam Salt stress response/antifungal 41 136 IPR002902 -
Pral1688g00008 946 Pfam Salt stress response/antifungal 156 250 IPR002902 -
Pral1688g00008 946 Pfam Salt stress response/antifungal 323 414 IPR002902 -
Pral1688g00008 946 Pfam Salt stress response/antifungal 437 527 IPR002902 -
Pral1688g00008 946 FunFam Cysteine-rich receptor-like protein kinase 28 709 911 - -
Pral1688g00008 946 Gene3D Phosphorylase Kinase; domain 1 609 708 - -
Pral1688g00008 946 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 34 139 - -
Pral1688g00008 946 SMART serkin_6 633 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00008 946 FunFam Cysteine-rich receptor-like protein kinase 10 427 530 - -
Pral1688g00008 946 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 318 932 - -
Pral1688g00008 946 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 312 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1688g00008 Pral-Chr1688 118586 134300 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1688g00008 322 920 Receptor kinase-like Gene Family AT4G21410 48.529 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1688g00008 Pkinase 2.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1688g00008 - - pcin:129293328 799.66