Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1688g00007 ATGGCGGCTACCTTTAAAAAATTTGCGATCTTGTGCACACTAGTTTACCTGTGTGCTTTTCTTAGCTTGAAAACCTTAGCAGCTCCAACGTATCTTGCTGATCACTGCACAGAAAATGGCACCTACACCTCTGATAGCAGATTTGGTGGCAATCTCAATGCTCTCCTCTCTTCCCTCGTCACCAACGCCACACAGGTCAAGGGATATTACACTGTTATGGGATTCGGATTCACCGACGCCGTCAACGGACTTTTCAACTGCCGGGCAGACCTTAACATCAGCAGTTGTCATCAGTGTGTCACCACCGCAGCCTCCCGGATCACACAGCGTTGCCCTAACCAGACGGAGGCCATCATCTGGTATGAAGAGTGCATGCTGCGATACACAGACAGGTACTTCAAGTTTGGCAGCACCGAACCTGGGACGAACCTGGTTGACGGGAGGAACATATCTGGCAACAATCTGAATGCGTTCAATCAAACGTTGTTCAGCTCGTTGAATAACATAGCAGAAGCAGCAGCGAATTCCCAGACGGCGGAGAAGTTCGCCACCGGGGAAGCAAAGTTTGGCAGCAACCAGACTGTGTATGGGCTTGCGCAGTGCACCGTTGACATACAGTCGGCGCAGTGTGAGACTTGCTTGAAAAATGCCATCGGAAGTTTTCCGATATGTTGTAACAGAGCTCGAGGGGCAAGAGCTTTGCTTGCTTCTTGTGTTGTCCGATATGAACCGTATCCATTTTACAGTTCATCTGATTCATCATTGACTTCTTCAGGAAAGAAGAAACTTTCATCACGAGCAGTTGCCTTGATTGTTGTCCTTGTTGTGGCTTCAGTAATTCTGTTGGGTTTTGTCAGCTTTTTGCTGCGGAGAAGAGCAAGGCACAGGCAGAGAAACATTTTAAGGGAAAATTTTGGGGAAGAACTGGCTACTTTGGAATCCCTGCAATTCAGTTTGACCACGATTGAAGCTGCCACAAATAGGTTTTCACATGAGAAAAAAATTGGCAGAGGTGGTTTTGGAGAAGTTTACAAGGGAACTCTTCCCGATGGGAGAGAAATAGCTGTCAAAAAGCTTTCAAGAAGTTCTGGACAAGGTGCAACGGAGTTTAAAACTGAAATCTTGCTAATTGCTAAGTTACAACACAGGAATTTGGTGGCTTTATTGGGATTTTGCCTAGAAGGACGAGAGAAAATGCTCATTTATGAATACGTACCCAATAAAAGTCTTGATCACTTTCTATTTGATCCCAAAAAGGAGAGGTTGCTGAATTGGTTTGAACGTTATAAGATTATTGGAGGCATTGCACGAGGAATTCATTATTTACATGAGCATTCTCGACTCAAAGTTATACACCGTGATCTTAAACCAAGCAATGTATTATTAGATGACAACATGAATCCAAAAATTTCAGACTTTGGCATGGCAAGAATCATTGCTATAGATCAAGATCAAATAAATACTAATAGAATTGTTGGTACATATGGTTATATGTCTCCAGAATATGCAATGCACGGTCAATTTTCTGAAAAGTCTGATGTATTTAGTTTTGGCGTCATCGTTCTTGAGATAGTTAGTGCAAAGAGGAATGCTCGTCCTATTGAAACACAAGACCTTGATGACCTCTTAAGTCAGGCTTGGAAACATTGGAGGAATCAAACACCGCTTGAGATAGTGGACCCAGAAATAAAAGATTCATGTTCTCAGAGTGAAGTGATCAAGTGCATCCAAATAGGTTTATTATGCGTTCAAGAGAACCCAGAAAATAGGCCCACAATGGCAAGGATTGTTTCATATCTAAGTAGCCTGTTAGCTGAATTGCCATTGCCTCGAGAACCAGCATTTCACATGGATATTGATTTGAAGCTGAATTTGGTATCATGGGAATCCAGTGCAGGTCAATCTAACTACAATTCTATGACTTCCTCAAATCATGAAACGTCAAAGAGTAATCATTTTCCAAGATAG 1968 0.4273 MAATFKKFAILCTLVYLCAFLSLKTLAAPTYLADHCTENGTYTSDSRFGGNLNALLSSLVTNATQVKGYYTVMGFGFTDAVNGLFNCRADLNISSCHQCVTTAASRITQRCPNQTEAIIWYEECMLRYTDRYFKFGSTEPGTNLVDGRNISGNNLNAFNQTLFSSLNNIAEAAANSQTAEKFATGEAKFGSNQTVYGLAQCTVDIQSAQCETCLKNAIGSFPICCNRARGARALLASCVVRYEPYPFYSSSDSSLTSSGKKKLSSRAVALIVVLVVASVILLGFVSFLLRRRARHRQRNILRENFGEELATLESLQFSLTTIEAATNRFSHEKKIGRGGFGEVYKGTLPDGREIAVKKLSRSSGQGATEFKTEILLIAKLQHRNLVALLGFCLEGREKMLIYEYVPNKSLDHFLFDPKKERLLNWFERYKIIGGIARGIHYLHEHSRLKVIHRDLKPSNVLLDDNMNPKISDFGMARIIAIDQDQINTNRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVIVLEIVSAKRNARPIETQDLDDLLSQAWKHWRNQTPLEIVDPEIKDSCSQSEVIKCIQIGLLCVQENPENRPTMARIVSYLSSLLAELPLPREPAFHMDIDLKLNLVSWESSAGQSNYNSMTSSNHETSKSNHFPR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1688g00007 655 Gene3D Transferase(Phosphotransferase) domain 1 405 608 - -
Pral1688g00007 655 Gene3D - 29 133 IPR038408 -
Pral1688g00007 655 Gene3D - 143 247 IPR038408 -
Pral1688g00007 655 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 290 404 - -
Pral1688g00007 655 CDD STKc_IRAK 335 603 - -
Pral1688g00007 655 FunFam Cysteine-rich receptor-like protein kinase 10 141 247 - -
Pral1688g00007 655 ProSiteProfiles Gnk2-homologous domain profile. 138 247 IPR002902 -
Pral1688g00007 655 ProSitePatterns Protein kinases ATP-binding region signature. 335 358 IPR017441 GO:0005524
Pral1688g00007 655 Gene3D Phosphorylase Kinase; domain 1 291 404 - -
Pral1688g00007 655 Pfam Salt stress response/antifungal 36 130 IPR002902 -
Pral1688g00007 655 Pfam Salt stress response/antifungal 155 244 IPR002902 -
Pral1688g00007 655 FunFam cysteine-rich receptor-like protein kinase 10 405 607 - -
Pral1688g00007 655 SMART serkin_6 329 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00007 655 Pfam Protein tyrosine and serine/threonine kinase 331 600 IPR001245 GO:0004672|GO:0006468
Pral1688g00007 655 SUPERFAMILY Protein kinase-like (PK-like) 314 624 IPR011009 -
Pral1688g00007 655 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 133 - -
Pral1688g00007 655 MobiDBLite consensus disorder prediction 635 655 - -
Pral1688g00007 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Pral1688g00007 655 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 647 - -
Pral1688g00007 655 ProSiteProfiles Protein kinase domain profile. 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00007 655 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1688g00007 Pral-Chr1688 90416 94549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1688g00007 1 615 Receptor kinase-like Gene Family AT4G05200 46.406 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1688g00007 PK_Tyr_Ser-Thr 5.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1688g00007 - - cam:101500396 798.89