Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1688g00006 ATGCGATTTAGTTTGTCTGCAACTGAAGCTGCAACGAATAAGTCTTCTCAGGCCAATAAAATAGGAAAGGGAGGATTTGGAGAAGTTTACAAGGGTATTCTTCCTAATGGGCAAGAAGTTGCAGTCAAGAGACTCTCTAAGGGCTCTCAACAAGGTTCACAACAAGAGCAAAAAATGTCAAGTTGGTTTGAACGGTGCAAAATTATTAGAGGAATTGCTCAAGGACTTTCATATTTACATGAACATTCACGATTCAAAATTATCCATCGTGACTTGAAACTCAGTAATATTTTATTTGATAACAATATGAAGCCCAAGATATCAGACTTTGGCATAGCAAAGATGTATGCTAATGCTAGCGATCAAAATGAAGAAAGTACGAGTAAGATTGTGGGAACACATGACTATATGGCTCCCGAATATGTAATATATGGAAAATTTTTGGAAAAATCAGATATTTTCAGTTTTGGTGTTATAATTTTGGAGATAATTAGTGGCAGGAGAAACGGCAGCTCCAATAAACCACACCTCTTAAGTCATGCTTGGAAACAATGGCAGAATGGGACACAACTTGAAATATTGGACCCATGTCTGATGAGAGGATCTTATTCAGAAAATGAAAGCATAAAATGTTTGCAGATTGGGTTACTATGTGTTCAAGCTGATCCAAATGATAGACTCACGATGTCTAACCTTGTTTTCTATCTGAGCAATCTGTGGATTGAATTGCAAAATCCAAGAGAACCTGCCTTCTTTACTCCCGGAAGTGGAATACGAGAGGTCTTCTATGAATGA 795 0.3736 MRFSLSATEAATNKSSQANKIGKGGFGEVYKGILPNGQEVAVKRLSKGSQQGSQQEQKMSSWFERCKIIRGIAQGLSYLHEHSRFKIIHRDLKLSNILFDNNMKPKISDFGIAKMYANASDQNEESTSKIVGTHDYMAPEYVIYGKFLEKSDIFSFGVIILEIISGRRNGSSNKPHLLSHAWKQWQNGTQLEILDPCLMRGSYSENESIKCLQIGLLCVQADPNDRLTMSNLVFYLSNLWIELQNPREPAFFTPGSGIREVFYE 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1688g00006 264 Gene3D Transferase(Phosphotransferase) domain 1 54 245 - -
Pral1688g00006 264 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00006 264 Pfam Protein kinase domain 64 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00006 264 FunFam Lectin-domain containing receptor kinase A4.3 48 250 - -
Pral1688g00006 264 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 55 - -
Pral1688g00006 264 Gene3D Transferase(Phosphotransferase) domain 1 2 53 - -
Pral1688g00006 264 ProSitePatterns Serine/Threonine protein kinases active-site signature. 87 99 IPR008271 GO:0004672|GO:0006468
Pral1688g00006 264 ProSitePatterns Protein kinases ATP-binding region signature. 21 43 IPR017441 GO:0005524
Pral1688g00006 264 SMART serkin_6 15 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00006 264 SUPERFAMILY Protein kinase-like (PK-like) 3 236 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1688g00006 Pral-Chr1688 73389 75417 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1688g00006 1 252 Receptor kinase-like Gene Family AT4G23280 48.638 7.04e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1688g00006 Pkinase 1.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1688g00006 - - pcin:129293778 280.411