Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1688g00005 ATGCTCATTATTGCTGTGTTCTGCCATGCCTCTTGGAGAAAGAGGAAGATTTACAAGAACATGCTCAAAGAAATCTGCAATGCGAAAAGCCAGAATTTCAGTTTGAAGTCTTCGCGATTTCGTTTGGTTGCTGTTGAAGCTGAAGTGAATAATTTCTCAGTTGAGAATAAAACACGAAAAGGTGGATTTAGAGCAGCTTACAAAAGTGACAAGCTCATATATGAGTTGGTCATCGGAATTGGCAGCGAAGGATATATGGGTACCATCGAAAACCCTATACTTGTGTTCGTCTCTCTAATGCTAATACTACTTAGCTTTGCCGCGGCTGATGAACAGGTTCCAGATTTCGGATGGTTGTTCTCCCAATGTGATTTTCATACTGATCACAAATCGTTGGATGCGTATGAAGCTAATGTGAGAGCCCTCCTCTCCGATCTCAGCTCCAAAGCCGCCCATGACAACGGCTTCTCCACCAGAGTTGTGGGCTGGGGAACAGAAAATTCCATCAGCGGACAAATTCTTTGCCGTGGCGACGTCACTCCGTCTACATGTCAACACGGTGTCACCGTCGCAGCCAACAAAACATTACGCCAATGCCCAAACGGTACCCAGTTCATAGCTTACTACGATCTCTGCATGTTGCGTTACACCAGCAAATCCTTCAAGTTCGATGGCTTAATCGGCGAAGATGGGGGCGACTGGGCTCTTAACAAGACGGAAATCTCTGACCAGAGCATTTTCAATCAAACAGTGTGGGTTCTTTTAGGGAATGTGACGGCAAAGGCTGCGAATTCAAACTTGCCGGATAAGAAATTTGCCACCCACGAAGTTCTAGTCTCGAATGTCAGCAAGGAATCTGCAGATTTACCAGATGTTCATCCCTCCCCTCCGCTTGTTCCTCTTGCACCTTCAGGAAAACGACATGCTGGATCACAAATTATTGCAGTGGTTATTGTTGCTGCCATTGTTATTTCAGTGACGCTTTTTTGTTTGATGAGCTGCTATTTGCTAAGGAGAAAACTACAGAGGAGCCAGCAATCTATTCTTACACAAAACTTTGGCAAAGAAAGTTCAAAGCTGAAGTCCTTGCGATTTAATCTTGCCACAATTAAAACTGCAACGAATAACTTTTCTCCCCAGAACAGAATTGGTAAAGGTGGATTTGGACATGTATACAAGGGAATTCTTCGTGATGGCCAAAAAATTGCGGTTAAAAGACTCTCCAAAAATTCTAAGCAAGGAGCATTAGAATTTAAGAATGAAGTTTTACTGATAGCCAAACTCCAACACAGAAATCTGGTGACTTTATTGGGGTTTTGCTTGGAAGAACAAGAGAAAATTCTTGTTTACGAATATGTTCCTAATAAGAGTATTGATTTCTTTTTATTTGATTCTGAAAACCAAAGACAATTAAATTGGCTAAAACAATGCAAAATTATTGGTGGAATTGCTCGAGACCTTCTTTACCTGCATGACCATTCTTGCCTCAAAGTTATTCATCATGATCTTAAACCTAGTAATGTTTTGTTAGATACTAAGATAGATCCAAAAATATCAGATTTTGGTATGGTAAGAATGGTTGCGATAGATCAAGATCAAGAAAATACAAATAGAATTGTTAGACCATATAGTTTTATGTCTCCAGAATATTTACTGTATGGACAAATTTCAAAGAAATCAGATGTGTTTAGTTTTGGAGTTATGGTCTTAGAGATAATTAGCAGCAAAAGGAATGCCAAGCTTGGAAGCAGTGGAATGAGGGAACACCATTACAAGTATTGGGCTCATGCCTAA 1794 0.4052 MLIIAVFCHASWRKRKIYKNMLKEICNAKSQNFSLKSSRFRLVAVEAEVNNFSVENKTRKGGFRAAYKSDKLIYELVIGIGSEGYMGTIENPILVFVSLMLILLSFAAADEQVPDFGWLFSQCDFHTDHKSLDAYEANVRALLSDLSSKAAHDNGFSTRVVGWGTENSISGQILCRGDVTPSTCQHGVTVAANKTLRQCPNGTQFIAYYDLCMLRYTSKSFKFDGLIGEDGGDWALNKTEISDQSIFNQTVWVLLGNVTAKAANSNLPDKKFATHEVLVSNVSKESADLPDVHPSPPLVPLAPSGKRHAGSQIIAVVIVAAIVISVTLFCLMSCYLLRRKLQRSQQSILTQNFGKESSKLKSLRFNLATIKTATNNFSPQNRIGKGGFGHVYKGILRDGQKIAVKRLSKNSKQGALEFKNEVLLIAKLQHRNLVTLLGFCLEEQEKILVYEYVPNKSIDFFLFDSENQRQLNWLKQCKIIGGIARDLLYLHDHSCLKVIHHDLKPSNVLLDTKIDPKISDFGMVRMVAIDQDQENTNRIVRPYSFMSPEYLLYGQISKKSDVFSFGVMVLEIISSKRNAKLGSSGMREHHYKYWAHA 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1688g00005 597 SMART serkin_6 377 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00005 597 Pfam Salt stress response/antifungal 130 218 IPR002902 -
Pral1688g00005 597 ProSitePatterns Protein kinases ATP-binding region signature. 383 405 IPR017441 GO:0005524
Pral1688g00005 597 Gene3D Transferase(Phosphotransferase) domain 1 453 596 - -
Pral1688g00005 597 Pfam Protein tyrosine and serine/threonine kinase 380 575 IPR001245 GO:0004672|GO:0006468
Pral1688g00005 597 Gene3D - 119 221 IPR038408 -
Pral1688g00005 597 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 338 452 - -
Pral1688g00005 597 SUPERFAMILY Protein kinase-like (PK-like) 356 576 IPR011009 -
Pral1688g00005 597 FunFam Os07g0541700 protein 453 541 - -
Pral1688g00005 597 Gene3D Phosphorylase Kinase; domain 1 338 452 - -
Pral1688g00005 597 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 209 580 - -
Pral1688g00005 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Pral1688g00005 597 ProSiteProfiles Protein kinase domain profile. 377 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00005 597 ProSiteProfiles Gnk2-homologous domain profile. 116 221 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1688g00005 Pral-Chr1688 60893 70466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1688g00005 122 581 Receptor kinase-like Gene Family AT4G11490 37.765 8.86e-96 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1688g00005 PK_Tyr_Ser-Thr 2.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1688g00005 - - ccaj:109813299 436.417