Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1688g00004 TTGCTGAGGAGTAAGCTAAGGACGAGCCAGCAAGCCATTCTTACAAAAAACTTTGGCGAAGAAAGTTCAAAGTTGAAGTCCCTGAGATTTAATCTGACTACAATTGAAGCTGCAACTGATAAGTTTTCTCCCCACAATAGAATTGGCAAAGGTGGATTTGGACATATACAAGTTCTTCATGGCGGACAAGAAATAGCTGTGAAAAGGCTCTCGAAAAATTCTGTACAAGGAGCATTAGAATTTAAGAATGAAGTTTTGCTGATAGCCAAGCTCCAACACAGAAATCTAGTCACCTTGTTGGGATTTTGTTTGGAAGAACAAGAGAAAATTCTTGTTTATGAATATGTTCCTAACAAGAGCATTGATTTCTTTTTATTTGATTCTGAAAATCAAAGACAATTAAATTGGCTGGAACGATTCAACATCATTGGTGGAATTGCTCGTGGACTTCTTTACTTACATGAACATTCTTGTCTCAAAATTATTCACCGTGATCTTAAACCAAGTAATGTTTTATTAGACAGCAAGAAGAATCCAAAAATATCAGATTTTGGCATGGCAAAATGGTCCACAATAGACCAAGATCAAGAAAATATAAACAGAATTGTTGGAACATATTCATGGCTATATGTTCCAGAATATTTAATGTACGGACAATTTTCAGAGAAATCAGATATATTTAGTTTTGGAGTTATAATCTTAGAGATAATTAGTGGCAAAAGGAATGCTAGATCTTCTGAATCACACCTCTTGACTCATGCTTGGAAGCAATGGAATGAGGGAACGCCATTACAAGTATTGGACTCATGTCTAATGGAATCTTGCTCTCAGGCTGAAGTAAAAAGATGTGTGCAAATTGGGTTATTGTGTGTTCAAGAAAATCCAGAAGATAGGCCAACAATGTCTCAAACTGTTTCATATCTCGGTAATCCTTCCATTGAATTGCCACCTCCAAGAGAACCAGCATTCTTCATGCGTAGCAGACAAAATCCAAGTGAAAATACTGCAACAGAATCACTTTTGGATCAATCTTCTGCGAATCCAAATCCGTTCTCTTTGAATGAAATGTCTAGGACTGAACTTTTCCCCCGATAA 1095 0.3653 LLRSKLRTSQQAILTKNFGEESSKLKSLRFNLTTIEAATDKFSPHNRIGKGGFGHIQVLHGGQEIAVKRLSKNSVQGALEFKNEVLLIAKLQHRNLVTLLGFCLEEQEKILVYEYVPNKSIDFFLFDSENQRQLNWLERFNIIGGIARGLLYLHEHSCLKIIHRDLKPSNVLLDSKKNPKISDFGMAKWSTIDQDQENINRIVGTYSWLYVPEYLMYGQFSEKSDIFSFGVIILEIISGKRNARSSESHLLTHAWKQWNEGTPLQVLDSCLMESCSQAEVKRCVQIGLLCVQENPEDRPTMSQTVSYLGNPSIELPPPREPAFFMRSRQNPSENTATESLLDQSSANPNPFSLNEMSRTELFPR 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1688g00004 364 Pfam Protein tyrosine and serine/threonine kinase 46 307 IPR001245 GO:0004672|GO:0006468
Pral1688g00004 364 Gene3D Phosphorylase Kinase; domain 1 15 115 - -
Pral1688g00004 364 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 333 - -
Pral1688g00004 364 Gene3D Transferase(Phosphotransferase) domain 1 116 314 - -
Pral1688g00004 364 FunFam cysteine-rich receptor-like protein kinase 10 116 315 - -
Pral1688g00004 364 SUPERFAMILY Protein kinase-like (PK-like) 26 332 IPR011009 -
Pral1688g00004 364 SMART serkin_6 42 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00004 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Pral1688g00004 364 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 3 115 - -
Pral1688g00004 364 ProSitePatterns Protein kinases ATP-binding region signature. 48 68 IPR017441 GO:0005524
Pral1688g00004 364 MobiDBLite consensus disorder prediction 318 364 - -
Pral1688g00004 364 ProSiteProfiles Protein kinase domain profile. 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00004 364 MobiDBLite consensus disorder prediction 327 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1688g00004 Pral-Chr1688 48544 50187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1688g00004 20 364 Receptor kinase-like Gene Family AT4G11480 53.693 3.02e-130 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1688g00004 PK_Tyr_Ser-Thr 3.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1688g00004 - - pcin:129293778 470.314