Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1688g00003 ATGTCTATCATTTCTTTGGCTCTTGTTTCTTTCCTTTCTCATCTTCTTATTCTCACCGCCCAGCCTTTCGTATATTACAAATGCTTCGATCAAAGTGGTAACTTCACAAACACAAGTTCCTACCACACCAACCTCAATATCCTTCTCTCTAATTTCACTTCCGACACGAAAATTGACTATGGCTTCTACACTTACTCTTATGGCCAAGATCCTGACACAGTTAAAGCATTTGGTCTCTGCAGAGGAGATGTGAAGCCAGATACTTGCCGCAGTTGCATAAACAATGCCACAATCCTTCTCCCAAAGTTGTGTCCAAATCAAAAGGAAGCATTTGGATACTATGACTTGTGCATTTTTCGATACTCAAATCCTTCAATATCTGGGATATACCAATATCCTGACTTTTACTATGCTTTTAGTAGCAACCCAGAAAAGGTAAATAGAGATCCAGACAAGTACAAAGATTCGCTCGATCGTCTGATGCTGAATTTGAAAAGTATAGCTGCGGCTGGTGATTCTCATCGTAAGGTGGCTGTGGGAAATGCGACAGTGGATAAGTTTCGAACGGTTTACGGTCTTGCTCAGTGCATGCCTGATTTGTCTCAGCAAGATTGTGACGCCTGTTTGCTAAAGACAATCTCGGATATATCAGTATGTTGTGAGAACAAGGTTGGTGGGAGAGTGATCAAATTCAGCTGCAATATTAGATTTGATCATGTTCTGTTCTATGATCTTACAGTTATTGATTCATTACAATTGTCATTGCCCATCATTACTGCTCTCGCTCCATCTACCAATACTACTTCATCACAAGGAGGAAGTGCTAGCAGATCACAAACTGATGTCATCATTATCGTCCCCATCGTAGTTTCAATGATAATTTTTTGTTTGGTGGGCTGCTATCTGCTAAGGAGAAAAGTTACAAGGAAAAGAAAGCAGGCTATTCTTAGAGAAAACTTTGGCGAAGAAAGTTCATCCCTGAACTCCTTGCAATTTAGTTTGGCAACGATTGAAGTTGCAACAAATAAGTTTTCTGAAGAGAACAAAATAGGAAAAGGTGGATTTGGAGAAGTTTATAAGGGTGTTCTTCCTGATGGACGAGAAATTGCTGTAAAAAGACTTTCTAAAAGTTCTGGACAAGGAACATTAGAATTCAAGAATGAAATATTATTGATAGCCAAACTTCAACATAGAAATTTAGTGACCTTATTGGGATTTTGTTTGGAAGAGCAAGAGAAAATTCTTATCTATGAATATGTGCCAAACAAGAGCATTGATTTCTTTTTATTTGATCCTGAAAAGCAACGAGTACTCGATTGGTTTGAGCGTTTCAAAATCATAAGAGGCATTGCACAAGGACTTTGTTACATGCATGAATATTCTCGGCTTAAAGTTATTCATCGGGATCTCAAACTTTGCAATATCTTATTAGATGATAAGATGAATCCAAAAATATCAGATTTTGGTATGGCCAGAATGATTGCTATAGATGAAGACCAAGGAAGTACAAAAAGAATTGTTGGAACATATGGCTATATGGCTCCTGAATATTTAATATATGGACACTTTTCAGAAAAATCTGATGTTTTTAGTTTTGGAGTTATAATTTTAGAATTACTTAGCAGCAAGAAGAATGCCAAATCTTATGAATCATTCCTTTTAGCTGATGTTTGGAAGCATTGGAAGGAGGGAACACCATTACAAATATTGGACCCTTGTCTGATGGAATCTTCTTGTCAAATAGAAGCAATGAGATGCGTTCAGATTGGGCTCGTATGTGTTCAAAAGAATCCAGATGAGAGGCCAACAATGGCTGAAGTTGTTTCATATCTTAGTAATCTTTCCATTGAATTGCCATCTCCAAGAGAGCCACCATTCTTAATTCATTTAAATCCAACTATGTCAACAGAATGTAGTTCCGATCAAACAACTCAGAGCTCCAAGACAGTGGTTTCAAATGAAATATCCATCACAGAGATCTTGCCTCGGTGCAAAATGATTGCTTTCGTCGTCGTCTTCTTCTTCATCTTCATCTTCAGCACCACCCAATCAGCCGCCTCTGTATTCAACGATTTCAACTGCACAACCAATATCACCTTCACTCCGAACGGCACCTTCCAAAGCAACCTCGCCGCCCTTCTCTCCTCTCTCTCCTCCAACGCCACCGGCGGCATCAGATTCTACAACACCACCGTCGGCGGCCGCGGCGGAACAAACACCGTATACGGCCTCTTCGTGTGCCGCGGCGATGTGCCGTATCCATTGTGCAGCGAGTGCGTTAACTTCGCCACCCAGAGGATAAGCTCATCGTGTCCTTCAGCGAAAGAAGCCATTATTTGGTACAACGAGTGCTTGCTGCGATATTCTTACAGGTCTATCTTCTCTGCCATGGAAGAATGGCCAAGATATCAAGTCAAGATTCCGTTAGGCGACCCTGGGCTTTTACGAACTCGGCGTTTCTACGATACTTTGGGATCTATTTTGAACGATCTGATAGATGGAGCAGCTCAGGCTCTTGGGAAATCTGATTCAAAGTTCGGTGTTCAGCAAGGTGACGCATCTGGAAACACAACGCTGTACGGCCTGGCTCAGTGCACGCCGGACTTAGCCACCGGCGACTGCAAGCGGTGTGTCAGGGATGCCATAGCGGAGATTACGACGTCGTGTTGCCGTGGTAGCATCGGACAAAGTGTAATGTTCCCCAGTTGCATTATTCGCTATGAAACATATCCATTTTATCAGCATGCCGGAACGTCGACACTCACGCCGGCGGCGACGGCTAACGGAAAAAGCAATAAATTGCGGACACAAATTATTGCAATTATTGTCCCCTCCATTATTGTTCTAGTGGCGATTCTCGTTTTGTGCTTCTACATGGTGCCTAGAAGAAATTCAAATTCAAAGAAGAAATCACAAAAAGCCACTGATCTCTCAGAAAATTTTGGGGTTGAAATTATTACCACAATGGATTCGTTGCAAATTGACATAGCTACAGTTAAAGTGGCTACGGACAATTTTTCTGAAAAAAGCAGGATTGGCAAAGGTGGATTTGGAGAAGTTTATAAGGGGGTTCTTCCTAATGGACAAGAGATAGCTGTGAAGCGATTGTCAAGAACTTCATCGCAGGGAGTTGAAGAATTCAAAAATGAGGTTTTGCTGATAGCTAAACTTCAACACAGAAATTTAGTAAGGTTACTGGGATTCTGCCTTGAAGATGATGAGAAGATACTTATCTATGAATATGTGCCTAACAAAAGCCTTAACCATTTCCTATTTGATCCTTTGAAGCAAAGGGAATTAACTTGGCCTGAACGTTTTAAGATTATAAAAGGAATTGCTCGAGGAATCCTATATTTACATGAAGACTCTCGTCTTAAGGTCATACATCGTGATCTTAAACCAAGTAATGTTTTGTTAGATAGTAACTTGAGTCCAAAAATCTCAGATTTTGGTATGGCAAGACTAATAACACTAGACCAAGTTGAAGGAAGCACAAACAGGATTGTTGGAACATATGGCTATATATCTCCAGAATATGCAATGCACGGATATTTTTCTATAAAATCCGATGTCTTTAGTTTTGGAGTGATGATGCTCGAGATTATTAGTGGAAGAAAGAATTCATATTCTTATGAATCATGTCGCATTGATGATCTCTTGAGCAATGCTTGGAGAAAATGGAGGGATGAATCAATAGAGGAATTGATGGATCCAGCAGTGAGAGAATCATATTCTCAACAAGAAGTGTTTAGGTGCATCCAGATTGGTTTATTGTGCGTTCAAGAAAATCCAGATGATAGGCCTACAATGGGAAACGTTGCTTCATATCTTAGCAACATTACAGTTGAATTGCCATATCCTCTGGAACCTGCGTTTTTCATGCAAGGTAGAAGAAGAAGAAACCATATGCATGATCCCAATTCTGATCACTCCACCAATTACTCTGTCTCCTCAACCATTAATGAGATGTCCATCAGCAAATTTTTCCCTCGCTAA 3996 0.4042 MSIISLALVSFLSHLLILTAQPFVYYKCFDQSGNFTNTSSYHTNLNILLSNFTSDTKIDYGFYTYSYGQDPDTVKAFGLCRGDVKPDTCRSCINNATILLPKLCPNQKEAFGYYDLCIFRYSNPSISGIYQYPDFYYAFSSNPEKVNRDPDKYKDSLDRLMLNLKSIAAAGDSHRKVAVGNATVDKFRTVYGLAQCMPDLSQQDCDACLLKTISDISVCCENKVGGRVIKFSCNIRFDHVLFYDLTVIDSLQLSLPIITALAPSTNTTSSQGGSASRSQTDVIIIVPIVVSMIIFCLVGCYLLRRKVTRKRKQAILRENFGEESSSLNSLQFSLATIEVATNKFSEENKIGKGGFGEVYKGVLPDGREIAVKRLSKSSGQGTLEFKNEILLIAKLQHRNLVTLLGFCLEEQEKILIYEYVPNKSIDFFLFDPEKQRVLDWFERFKIIRGIAQGLCYMHEYSRLKVIHRDLKLCNILLDDKMNPKISDFGMARMIAIDEDQGSTKRIVGTYGYMAPEYLIYGHFSEKSDVFSFGVIILELLSSKKNAKSYESFLLADVWKHWKEGTPLQILDPCLMESSCQIEAMRCVQIGLVCVQKNPDERPTMAEVVSYLSNLSIELPSPREPPFLIHLNPTMSTECSSDQTTQSSKTVVSNEISITEILPRCKMIAFVVVFFFIFIFSTTQSAASVFNDFNCTTNITFTPNGTFQSNLAALLSSLSSNATGGIRFYNTTVGGRGGTNTVYGLFVCRGDVPYPLCSECVNFATQRISSSCPSAKEAIIWYNECLLRYSYRSIFSAMEEWPRYQVKIPLGDPGLLRTRRFYDTLGSILNDLIDGAAQALGKSDSKFGVQQGDASGNTTLYGLAQCTPDLATGDCKRCVRDAIAEITTSCCRGSIGQSVMFPSCIIRYETYPFYQHAGTSTLTPAATANGKSNKLRTQIIAIIVPSIIVLVAILVLCFYMVPRRNSNSKKKSQKATDLSENFGVEIITTMDSLQIDIATVKVATDNFSEKSRIGKGGFGEVYKGVLPNGQEIAVKRLSRTSSQGVEEFKNEVLLIAKLQHRNLVRLLGFCLEDDEKILIYEYVPNKSLNHFLFDPLKQRELTWPERFKIIKGIARGILYLHEDSRLKVIHRDLKPSNVLLDSNLSPKISDFGMARLITLDQVEGSTNRIVGTYGYISPEYAMHGYFSIKSDVFSFGVMMLEIISGRKNSYSYESCRIDDLLSNAWRKWRDESIEELMDPAVRESYSQQEVFRCIQIGLLCVQENPDDRPTMGNVASYLSNITVELPYPLEPAFFMQGRRRRNHMHDPNSDHSTNYSVSSTINEMSISKFFPR 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1688g00003 1331 ProSiteProfiles Gnk2-homologous domain profile. 688 793 IPR002902 -
Pral1688g00003 1331 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 687 792 - -
Pral1688g00003 1331 FunFam Cysteine-rich receptor-like protein kinase 10 137 242 - -
Pral1688g00003 1331 FunFam cysteine-rich receptor-like protein kinase 10 420 618 - -
Pral1688g00003 1331 SUPERFAMILY Protein kinase-like (PK-like) 327 646 IPR011009 -
Pral1688g00003 1331 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 304 419 - -
Pral1688g00003 1331 ProSiteProfiles Gnk2-homologous domain profile. 23 126 IPR002902 -
Pral1688g00003 1331 SMART serkin_6 1006 1277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00003 1331 SMART serkin_6 344 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00003 1331 ProSiteProfiles Protein kinase domain profile. 1006 1277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00003 1331 Pfam Protein tyrosine and serine/threonine kinase 1009 1276 IPR001245 GO:0004672|GO:0006468
Pral1688g00003 1331 ProSiteProfiles Protein kinase domain profile. 344 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00003 1331 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 689 1326 - -
Pral1688g00003 1331 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 21 126 - -
Pral1688g00003 1331 Pfam Protein kinase domain 345 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1688g00003 1331 FunFam Cysteine-rich receptor-like protein kinase 10 963 1081 - -
Pral1688g00003 1331 SUPERFAMILY Protein kinase-like (PK-like) 994 1308 IPR011009 -
Pral1688g00003 1331 Gene3D Transferase(Phosphotransferase) domain 1 420 619 - -
Pral1688g00003 1331 Gene3D Transferase(Phosphotransferase) domain 1 1082 1285 - -
Pral1688g00003 1331 Gene3D Phosphorylase Kinase; domain 1 304 419 - -
Pral1688g00003 1331 Gene3D Phosphorylase Kinase; domain 1 964 1081 - -
Pral1688g00003 1331 Gene3D - 815 912 IPR038408 -
Pral1688g00003 1331 Gene3D - 21 125 IPR038408 -
Pral1688g00003 1331 Gene3D - 687 792 IPR038408 -
Pral1688g00003 1331 Gene3D - 135 242 IPR038408 -
Pral1688g00003 1331 ProSiteProfiles Gnk2-homologous domain profile. 802 912 IPR002902 -
Pral1688g00003 1331 CDD STKc_IRAK 350 614 - -
Pral1688g00003 1331 Pfam Salt stress response/antifungal 147 238 IPR002902 -
Pral1688g00003 1331 Pfam Salt stress response/antifungal 818 910 IPR002902 -
Pral1688g00003 1331 Pfam Salt stress response/antifungal 694 789 IPR002902 -
Pral1688g00003 1331 Pfam Salt stress response/antifungal 28 123 IPR002902 -
Pral1688g00003 1331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Pral1688g00003 1331 CDD STKc_IRAK 1012 1280 - -
Pral1688g00003 1331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1127 1139 IPR008271 GO:0004672|GO:0006468
Pral1688g00003 1331 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Pral1688g00003 1331 FunFam cysteine-rich receptor-like protein kinase 10 1082 1284 - -
Pral1688g00003 1331 ProSitePatterns Protein kinases ATP-binding region signature. 1012 1034 IPR017441 GO:0005524
Pral1688g00003 1331 ProSiteProfiles Gnk2-homologous domain profile. 134 242 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1688g00003 Pral-Chr1688 18582 32902 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1688g00003 2 663 Receptor kinase-like Gene Family AT4G05200 42.604 4.72e-173 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1688g00003 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1688g00003 - - gsj:114402116 1323.15