Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1687g00009 ATGCATCACTTGGCAGGCTGTCCTGATGTGATATCCATAAAAGGAGCTTATGAGGATGCCCTGGCTGTTCATGTTGTGATGGAGCTATGTGCAGGTGGTGAGTTGTTTGACAGGATTGTACAGAGAGGGCATTACACTGAGAGAAAAGCAGCTCAAATAGCCAGGACTGTAGTTGGTGTCATTGAAGCTTGTCACTCACTGGGAGTAATGCATCGCGATCTTAAGCCCGAAAATTTTCTCTTCACTAATGATCAGGAGGATTCTCCCCTTAAGGCTATCGATTTTGGCTTGTCTGCTTTCTTCAAACCAGGGGATATATTTAATGACGTGGTGGGTAGCCCATACTACGTTGCACCAGAAGTCCTAAAGAAGCGTTATGGTCCAGAAGCTGATGTGTGGAGTGCTGGTGTAATCATATTCATTCTGTTAAGTGGGGTGCCTCCGTTTTGGGCTGAAACGGAGAAAGAGATATTTAGCGAAGTATTGCACGGTGAACTTGATTTCAAGTCAGATCCCTGGCCTAAGATTTCTGAGAGTGCAAAGGACTTGGTCAGGAAGATGCTCGATAGAGATCCTAGCAAGAGATTAACAGCCCACGAAGTTCTCTGTCATCCTTGGATTCGAGTTGATGGAGCAGCTCCTGATAAGCCTCTTGACCCTGCAGTTCTGACTCGCCTGAAGCAGTTTTCTGCAATGAACAAGCTCAAAAAAATGGCTCTTAGAATTATTGCCCAGAACCTATCCGAGGAAGAAATTGCAGGGTTGAAAGAAATGTTTAAAATGATAGATACAGACAATAGTGGTCAAATTACTTTTGAAGAACTCAAGGCTGGATTGAAAGCCTTCGGAGCTAACATCGATGAATCTGAGATTCACAATCTAATGCAAGCGGTAAACGTTGACAATAGTGGCACAATAGACTACGCAGAATTCATAGCAGCAACCTTGAATCTCAACAAAGCTGAGAAAGAAGACAACTTAGTCGCTGCCTTCCGTTATTTTGACAAAGACGGAAGTGGCTACATCACCCAAGACGAGCTTCAACAAGTTTGTGAAGAAATTGGTCTGGAGAATGTTCGCTGGGAGGAGATCATGCGTGAGGCTGATCAAGATAATGATGGCCGAATAGACTACAATGAATTTGTGGCAATGATGCAGATAGACAATGCAGATATGGTAAAGAAGGGCATAAGGCGGAAATAA 1203 0.4381 MHHLAGCPDVISIKGAYEDALAVHVVMELCAGGELFDRIVQRGHYTERKAAQIARTVVGVIEACHSLGVMHRDLKPENFLFTNDQEDSPLKAIDFGLSAFFKPGDIFNDVVGSPYYVAPEVLKKRYGPEADVWSAGVIIFILLSGVPPFWAETEKEIFSEVLHGELDFKSDPWPKISESAKDLVRKMLDRDPSKRLTAHEVLCHPWIRVDGAAPDKPLDPAVLTRLKQFSAMNKLKKMALRIIAQNLSEEEIAGLKEMFKMIDTDNSGQITFEELKAGLKAFGANIDESEIHNLMQAVNVDNSGTIDYAEFIAATLNLNKAEKEDNLVAAFRYFDKDGSGYITQDELQQVCEEIGLENVRWEEIMREADQDNDGRIDYNEFVAMMQIDNADMVKKGIRRK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1687g00009 400 CDD STKc_CAMK 1 206 - -
Pral1687g00009 400 FunFam Calcium-dependent protein kinase 1 215 389 - -
Pral1687g00009 400 Gene3D - 214 389 - -
Pral1687g00009 400 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Pral1687g00009 400 CDD EFh 327 386 IPR002048 GO:0005509
Pral1687g00009 400 ProSiteProfiles EF-hand calcium-binding domain profile. 286 321 IPR002048 GO:0005509
Pral1687g00009 400 SUPERFAMILY EF-hand 246 388 IPR011992 -
Pral1687g00009 400 Pfam Protein kinase domain 3 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1687g00009 400 SUPERFAMILY Protein kinase-like (PK-like) 1 228 IPR011009 -
Pral1687g00009 400 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
Pral1687g00009 400 FunFam Calcium-dependent protein kinase SK5 35 219 - -
Pral1687g00009 400 Gene3D Transferase(Phosphotransferase) domain 1 35 213 - -
Pral1687g00009 400 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Pral1687g00009 400 SMART efh_1 290 318 IPR002048 GO:0005509
Pral1687g00009 400 SMART efh_1 360 388 IPR002048 GO:0005509
Pral1687g00009 400 SMART efh_1 254 282 IPR002048 GO:0005509
Pral1687g00009 400 SMART efh_1 326 354 IPR002048 GO:0005509
Pral1687g00009 400 ProSiteProfiles EF-hand calcium-binding domain profile. 360 391 IPR002048 GO:0005509
Pral1687g00009 400 ProSiteProfiles EF-hand calcium-binding domain profile. 322 357 IPR002048 GO:0005509
Pral1687g00009 400 CDD EFh 255 314 IPR002048 GO:0005509
Pral1687g00009 400 Pfam EF-hand domain pair 255 315 IPR002048 GO:0005509
Pral1687g00009 400 Pfam EF-hand domain pair 327 386 IPR002048 GO:0005509
Pral1687g00009 400 ProSitePatterns EF-hand calcium-binding domain. 263 275 IPR018247 -
Pral1687g00009 400 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1687g00009 400 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1687g00009 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Pral1687g00009 400 ProSitePatterns EF-hand calcium-binding domain. 369 381 IPR018247 -
Pral1687g00009 400 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1687g00009 Pral-Chr1687 25199 27616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1687g00009 1 386 EF-hand Containing Proteins AT5G04870 81.347 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral1687g00009 Pkinase 6e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1687g00009 K13412 - rcu:8259786 681.404