Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1683g00004 ATGTCGTCGTCTCTGATCTCGAACCCGGTGACAAACACGGACCGGTCTCGTGACCCCTCCAAGAGGAGGAAGAAGAAGAAAGCTCAACTCAAGCAACAGCTAGAGGAACAAAATATTAAATGGAAGTCGCCGGCTCAGCAACAAATCTACTCCTCCAAGCTCCACCAAGCCTTGGCCAGAGTCAACCTCGGCTCCTCCGGTTCCTCAGCCGGCGACGCGCCCCGCCGCGGTAAAGCCGTCCGCGAAGCTGCTGATAGAGTCCTGGCCGTCACTGCTAAGGGCAAGACCCGGTGGAGCCGAGCCATCCTTACCAATCGGCTTAAGCTGAAATTCAGGAAGCACAAGAGACAGAGAATCACGGCGGCGGCCGCTTCCCCTGCCCGGTCGAAGAAGCCTAGAGTGAGCGTTCTCCGGCTGAGGGGGAAGAGCTTGCCAACGGTTCAGAGGAAAGTGAGGTTTCTTGGCCGGCTGGTCCCCGGTTGCAGGAAACAACCGGTGCCGGTGATATTGGAAGAAGCGATTGATTACATATCGGCACTCGAAATGCAAGTCCGAGCCATGAGCACTCTCGCTGACCTTCTTTCTGGGTCAACTACTCCCGGCGCCGGCTCGAGTTCCTCGGCGCCACCCAGCTGA 636 0.5786 MSSSLISNPVTNTDRSRDPSKRRKKKKAQLKQQLEEQNIKWKSPAQQQIYSSKLHQALARVNLGSSGSSAGDAPRRGKAVREAADRVLAVTAKGKTRWSRAILTNRLKLKFRKHKRQRITAAAASPARSKKPRVSVLRLRGKSLPTVQRKVRFLGRLVPGCRKQPVPVILEEAIDYISALEMQVRAMSTLADLLSGSTTPGAGSSSSAPPS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1683g00004 211 MobiDBLite consensus disorder prediction 1 42 - -
Pral1683g00004 211 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 197 IPR036638 GO:0046983
Pral1683g00004 211 Coils Coil 20 40 - -
Pral1683g00004 211 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 43 194 IPR044660 GO:0006355
Pral1683g00004 211 CDD bHLH_AtIBH1_like 136 191 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1683g00004 Pral-Chr1683 35702 37062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1683g00004 36 210 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 59.358 3.08e-55 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1683g00004 - - qsa:O6P43_003690 253.832