Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1682g00004 ATGGACGCCGCAGTGGTGGGAGCAGTGCTTTCTCCGACCATCCAAACCATACTAGACTGTATAACCTCAAGTAAGTTCCGAGAATTTGTTAAGGACAGAGAGCTAAATGTTCGACTCTTGGATGACCTGAAGATAACTCTCATTATGCTTGATGCTATTCTCATTGATGCTGACGAGAAGCAGATCACTAGTCCTGCAGTGAAAAGATGGCTTGAAGAGTTGAAAGATGCCATTTATGATGCAGAAGATTTGTTGGATGAAATCAACACTGACTCTCTCAGATACCAGGTGGAACAAGATTCTCAGGAAGTTTCTGATAAGTTGATCTCCTTCTTTTCTCCTTCTGTTGGCGGAATGTACTGGAAAATGAACCAGAAGCTTAAAGAAATACACCAAAGGCTTAACCTCTTTGCTGAACAAAAAGATATCCTTCATTTGCAGAGTGTTAGCCGGAGGGCACATAAAAAGACTACAACTTCACTAGTAAATGAGTCTGTTGTAGTTGGCAGAGAGGATGATAAGGAGAAACTGTTGAACATGCTTGGGTGTGATGAAAACGAAGAGGGTAATAATATAGGAGTGATCGCCATCTGGGGCATCGGTGGGGTTGGTAAAACAACCCTTGCTCAACTGCTTTATAATGATGAGAAAGTGCAGCAATATTTTGATTTGAAGGCTTGGACATGTGTTTCCGAAGATTTCAATGTTTTTGAGGTGACCAAGAATATTTTAGAATCTGTCAGCTCAAAAGCTCATAATAGCAAAAATCTAGAAATTCTTCAAGTTGAACTGAGAAATAGCTTGAGGGGCAAAAAATTTTTGATTGTAATGGATGATCTGTGGAATGATAGATATAGTGATTGGGATGATCTGGTTGCTCCTTTCCGCAATGGAAAAAGGGGGAGTAAGATCATCATAACAACTCGCCAACAAAGAGTTGCTGAAATTACACATACATTTCCTGCGTATAAGTTGTCAACTCTCTCTAATGAAAATTGTTGGTGTTTACTAGCCAAGCATACACTTAAAAAGGAAGATCTTAACAAGCATCCAGAGCTAGAAGCAATCGGAAGGAAAATTGCAAGAAAATGTTGTGGGCTACCGATTGCTGCCAGATCAATTGGAGGTCTTTTGCGTTCAAAAGTGGATGAAAAGGAATGGTATAGAATTCTAAATAGTAATATGTGGGACTTGCCAAGAGATGATGTTCTACCTGCTTTGTATCTGAGTTATGTTTATCTTCCACCACATTTAAAGAGATGTTTTGCTTATTGCTCCATATTCCCAAAAGATCACGCATTGGATAGGAAGCAATTGGTCTTGTTATGGATGGCTGAAGGTTTTGTACAACAATACTCCGAACTGGAGATCGAATCAGATAACTGCTTTAATGAATTACTATCTAGATCATTCATTCATCAGCATGAAGATCATCCAGAAAAGTTTATCATGCATGATCTCATCATCGATTTAGCCAAGCTTGTGTCTGGCAACATTTGTATTTGGTTCGAAGGTGATGAAATCCCAACAACTACTGCTCGCCATGTATCATATCCCAAACAAGGATACGATGGCTCTGAAATGTTCAAGAGTTTTTATCACCTAAGTTCTTTGAGGACTTTCCTGCCGCAACAAACTTGGCCATTTATAGAATCATGTGTCTTGAGCAAAAAGGTCTCACATGATTTGCTGCCAAAACTGACACGTCTAAGGGTATTGTCTTTGTCCATGTATTCCAATATCACCGAGTTGCCTGATTCAATTGGCAATTTGAAACATCTGTGGTATCTTGATCTATCCTATACTAAAATCACAAGGTTGCCTGATGCCACCTTTAAACTTTGTAATTTGCAGACTTTGCTTTTATCATACTGTAAGTCTTTCAGTGAATTGCCTAAGAGTATAGAAAAGCTTGTCAACCTACGTCACCTGGATATCACCGGCACTGCTTTGAAGGAGATGCCAACACAGATTACCAAACTACAAAATCTTCATAGTTTGAGTACTTTTGTGGTGAGCAAACAATCGGATGGATTGAGAATCAAGGAGTTAAGAAAGCTACCTCATCTAGAAGGCAAGCTTTCAATTTTGAAGTTACAAAATGTTGTTGATCCCATGGATGCTTTCGAGGCAAAGTTGAAGAGAAGAGAGAAAATTGAGGAGTTAGTGTTGGAGTGGGATAGTGATGATTCTCAAGACTCACCAACAGTGAAAAATATACTTAACATGTTTCATCCTTCAGCAAAGTTACAGAGATTGACCATCAACCGTTATGGTGGTACTAGCTTTCCAAATTGGGTGGGAGATTCTTCATTTACCAATATCACCTTTTTATGCGTGAGCAATTGCAAAGGTTGTTTATCCCTTCCACCTTTTGGGCAATTACCTTCTCTTAAAGAGCTTTCAATTCAAGGAATGGCTTCTGTAAAGATAGTTGGGCATGAGTTCTATTGCAATCAAGCAGGCTCCTCTTCATTTCATCCATTTCCGTCCTTGGAAATTCTAAAATTTGAAGATATGCCGGCTTGGGAGCAATGGAGGACACCATTTAAAGGTGAGGGTATCGAATTTCCCTTTCCCAGTCTCAAACATTTGTACTTGTATAATTGTCCTCAGTTGAAGGGAGACATGCCCGACAATCTTCCATCACTGAGAAAGGTCGATATACTAAACTGCAGTCATTTGGAAGCCAAATCATCAGCATTGAAATGGATTGCTTGCATTCAAAAATTAAACATTAACCAAGGGGAAAAGGACTTGCTGAGGGCCATTGAAAATTTTTCTCTAGACTCATTGAAACGCCTGAGAATTACTGATTGTTCCAGCTTGCAGTCTTTGTCTAGAATGATATCGGCATGTCACTGCCTTCAAAAATTGTATCTCAAAAGCATCCCATCTTTAGAGTCCTTGCCAATTCATGGTTTGCCCACTTCATTGCAGCGACTTAGAATTGAAGATTGCAGTAAATTAGAATTCCCACCTCAGGAATCTTGGCAAAACTACACCAGAATTGAATTTTTGCTCATTAAAAATAGTTGCGATTCATTGACATTCTTTCCATTAGGTAGTTTCCCCAAGCTTAAAATTCTGGTGGTTGAAGGTTGTCATAATCTGGAAACATTTACACAAGTTGACGGGTCTTCCCCTACCTTAGAATCCCTTGTTCTGTCTGATTGTAAGCAATTCAGATCAATGTCACAAGTACAAAGTGAATCCCTCACTACCCTTAAGTACTTTTCTCTTTCTCAGCTTCCGAATTTGGAATCACTGCCTGAATGTGGTTTGCCTTCTACCTTGCGATCATTTGTTATAGTTGACTGTGAGCGACTATCTTCCGTCCCTCTTAAAAAATGGGGTTTCCAAGAGTTGACATATCTCTCAGGACTTCAGGTCAAAGGTGATGGAAGTGAAAAGACTCTCTGTAACTTACTGAAGTATCAATTATTACCCACTTCTCTCGTGAGAATCGACATCTGTGATTTCTCTAATCTTAAGTTTTTATATGGAAAAGGGCTTCGACACCTTACTTGTTTAGAAGAGCTCTATATCTCTGAGTGTCCAGAGCTTGAATTCTTGCCAGAAGATGAGCTGCCATCCTCTCTTTTGGAGCTCAATATCTTAGGCTGTCCTAAATTACGTAAAAGATATGACCATCAAAAAGGACAACACTTCTCCGAGATTGCTCATATTCCTACCTTACAAATAGATGGCATATATTATGATCCTTGGGAAGCGTCACAAGAACGTACTCGGCTTTCAAGGGGAGAAGGTGAGGGAATCAATAAAACTCGGGAGCTTCCAAATAAAAGAGCTCTATTGGAAGCAAAAAGCGTGTTGAGAAAAATGAAAGGCGATAAGGATGATTTGCTGCTATTTTGGTAG 3882 0.3944 MDAAVVGAVLSPTIQTILDCITSSKFREFVKDRELNVRLLDDLKITLIMLDAILIDADEKQITSPAVKRWLEELKDAIYDAEDLLDEINTDSLRYQVEQDSQEVSDKLISFFSPSVGGMYWKMNQKLKEIHQRLNLFAEQKDILHLQSVSRRAHKKTTTSLVNESVVVGREDDKEKLLNMLGCDENEEGNNIGVIAIWGIGGVGKTTLAQLLYNDEKVQQYFDLKAWTCVSEDFNVFEVTKNILESVSSKAHNSKNLEILQVELRNSLRGKKFLIVMDDLWNDRYSDWDDLVAPFRNGKRGSKIIITTRQQRVAEITHTFPAYKLSTLSNENCWCLLAKHTLKKEDLNKHPELEAIGRKIARKCCGLPIAARSIGGLLRSKVDEKEWYRILNSNMWDLPRDDVLPALYLSYVYLPPHLKRCFAYCSIFPKDHALDRKQLVLLWMAEGFVQQYSELEIESDNCFNELLSRSFIHQHEDHPEKFIMHDLIIDLAKLVSGNICIWFEGDEIPTTTARHVSYPKQGYDGSEMFKSFYHLSSLRTFLPQQTWPFIESCVLSKKVSHDLLPKLTRLRVLSLSMYSNITELPDSIGNLKHLWYLDLSYTKITRLPDATFKLCNLQTLLLSYCKSFSELPKSIEKLVNLRHLDITGTALKEMPTQITKLQNLHSLSTFVVSKQSDGLRIKELRKLPHLEGKLSILKLQNVVDPMDAFEAKLKRREKIEELVLEWDSDDSQDSPTVKNILNMFHPSAKLQRLTINRYGGTSFPNWVGDSSFTNITFLCVSNCKGCLSLPPFGQLPSLKELSIQGMASVKIVGHEFYCNQAGSSSFHPFPSLEILKFEDMPAWEQWRTPFKGEGIEFPFPSLKHLYLYNCPQLKGDMPDNLPSLRKVDILNCSHLEAKSSALKWIACIQKLNINQGEKDLLRAIENFSLDSLKRLRITDCSSLQSLSRMISACHCLQKLYLKSIPSLESLPIHGLPTSLQRLRIEDCSKLEFPPQESWQNYTRIEFLLIKNSCDSLTFFPLGSFPKLKILVVEGCHNLETFTQVDGSSPTLESLVLSDCKQFRSMSQVQSESLTTLKYFSLSQLPNLESLPECGLPSTLRSFVIVDCERLSSVPLKKWGFQELTYLSGLQVKGDGSEKTLCNLLKYQLLPTSLVRIDICDFSNLKFLYGKGLRHLTCLEELYISECPELEFLPEDELPSSLLELNILGCPKLRKRYDHQKGQHFSEIAHIPTLQIDGIYYDPWEASQERTRLSRGEGEGINKTRELPNKRALLEAKSVLRKMKGDKDDLLLFW 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1682g00004 1293 Pfam Rx N-terminal domain 10 102 IPR041118 -
Pral1682g00004 1293 Gene3D - 410 494 IPR036388 -
Pral1682g00004 1293 Gene3D - 327 409 IPR042197 -
Pral1682g00004 1293 Coils Coil 67 91 - -
Pral1682g00004 1293 PRINTS Disease resistance protein signature 879 895 - -
Pral1682g00004 1293 PRINTS Disease resistance protein signature 267 281 - -
Pral1682g00004 1293 PRINTS Disease resistance protein signature 364 378 - -
Pral1682g00004 1293 PRINTS Disease resistance protein signature 194 209 - -
Pral1682g00004 1293 SUPERFAMILY L domain-like 920 1215 - -
Pral1682g00004 1293 PANTHER DISEASE RESISTANCE PROTEIN RP 62 837 IPR044974 GO:0006952
Pral1682g00004 1293 FunFam Probable disease resistance protein At1g61300 149 319 - -
Pral1682g00004 1293 Pfam NB-ARC domain 171 392 IPR002182 GO:0043531
Pral1682g00004 1293 SUPERFAMILY L domain-like 484 914 - -
Pral1682g00004 1293 Gene3D Ribonuclease Inhibitor 916 1251 IPR032675 -
Pral1682g00004 1293 Gene3D - 34 136 - -
Pral1682g00004 1293 SMART LRR_typ_2 567 590 IPR003591 -
Pral1682g00004 1293 SMART LRR_typ_2 591 614 IPR003591 -
Pral1682g00004 1293 SMART LRR_typ_2 638 661 IPR003591 -
Pral1682g00004 1293 Gene3D - 148 320 IPR027417 -
Pral1682g00004 1293 Gene3D Ribonuclease Inhibitor 545 915 IPR032675 -
Pral1682g00004 1293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 425 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1682g00004 Pral-Chr1682 61044 65654 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1682g00004 581 676 WRKY Transcription Factor Family AT4G12020 40.206 9.10e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1682g00004 - - gmx:100803330 1220.3