Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1682g00002 ATGGAGTTCGTTACCAAGGTGGGGGAAGCACTTCTCTCTGCTTCTGTGCAGATCTTACTCGACCGGATCTCCTCAAGGGAGTTTCGAGATTTCATGAAAAATAGAAAGCTCAATGTCTCTCTCTTGGATGAGCTGAAGATTACTCTGTTGATGCTTGGTGCTGTCCTTAATGATGCAGAGGAGAAACAGATCACCTGCCCTCCAGTTAAGGAATGGCTTGAAGAGTTGAAAGACGCTATCTACGATGCAGAGGATTTGCTAGATGAGATCAACACTGAGTCTCTGAGATGCAAGGTGGAGCAAGATTCACAACATGTGGCTGACAAGGTGCGATCCTTCTTTTCTTCTTCTTTTAGTGAATTTTACTGGGGGCTAAACTCCAAGCTAGAAGCAACATCTCGAAGGCTTGAACACTTTGCCAAACAGAAGGATATCCTTGGTTTGCAAAGTGTTAGCTTCAGAGCGCATAAAACACCCACAACATCAGTGGTAAATGAATCTGTTGTAGTTGGCAGAGAGGATGAGAAGGAGAAACTATTGAAAATGCTTCTGTGTGATGAAGATCCAACGGGTAATGCTATAGGAGTGATCACTATATGGGGTATGGGTGGCCTAGGTAAAACTACCCTTGCTCAACTACTTTATAATGACAACAAGGTGCAAGAGCATTTTGATTTGAAGGCTTGGGCTTATGTTTCAGATGATTTTAGTGTTCTTAAGGTGACCAAGAACCTTGTTGAGTCGATCACTTCAAAAGTCTGCGATGGTAAAAATCTAGACTTTCTTCGTGTTGAGTTGAAAAATAGCGTGAAGAATAAAAAGTTTTTGATTGTGTTAGATGACCTTTGGAATGAAAAATACAGTGATTGGGATGATCTCATAACTCCTTTTCATAGTGGGAAACGGGGAAGCAGAATCATTGTAACAACTCGCCAACCAAGGGTTGCTGAAATCACACATACATTTCCCATACTTAAATTGAACCATCTTTTAGATGATAATTGTTGGTCTTTACTCTCTAAACATGCATTTGCAAATGTAGATCCAAACAAATATCCAGAGCTAGAAGCAATTGGAAGGCAAATTGTGAGAAAATGTGGTGGCCTACCGATTGCTGCCAAAACAATAGGAGGTCTTTTGCGTTCAAAAGTGGATACAAGGGAATGGAATAAAATTCTCAATAGCAATCAGTGGAACATACCAGATGATGATGTTATGCCTGCTTTGCGTTTGAGTTATCTATATCTTCCATCACATTTGAAGAAATGTTTTGCTTATTGCTCAATTTTCCCAAAGGATCTTGTGCTAGAGAAAAAGAAATTGGTCTTGTTATGGATGGCTGAAGGCATTGTGCAACAACAATCTCATGGGGAGAAGACATTTGAGATTGAAGCAGAAAACTATTTCAATGAATTGCTATCTAGGTCATTCTTCCAACAGTATGGTGGTAACCCAAAAAAGTTTGTCATGCATGATCTCATAAATGATTTGGCAAAATTTGTATCCGGCAAGAGCTATGCTCAATTTGAGGAAAATGAAGTCTCAAAATCTATACGACATTTATCATTTTCCTTGAAAAAATATAGTCGCTCTAAAGAATGTGAGAGCTTTTGCCGTACAAATAGTTTGAGAACTCTTTTGTCGCAAAATGAATTCAAAGATTGGTCAGCAACATGTGTTTTGACTAGAAAAGTGCTCCATGATTTGTTGACAAAACTAAAATGTCTAAGAGTATTGTCCTTGCCAAGATATGAAAACATTGTTGAGGTACCAATTTCAATTGGTAATTTGCAGCTTTTGCGGTATCTCAACTTTTCCTACACTTCAATTAGAAGGTTGCCTGATGTAGCCTTTACTCTTTACAATTTGCAAACATTGCTTTTATCAAATTGTGTGTTTTATTGA 1905 0.3858 MEFVTKVGEALLSASVQILLDRISSREFRDFMKNRKLNVSLLDELKITLLMLGAVLNDAEEKQITCPPVKEWLEELKDAIYDAEDLLDEINTESLRCKVEQDSQHVADKVRSFFSSSFSEFYWGLNSKLEATSRRLEHFAKQKDILGLQSVSFRAHKTPTTSVVNESVVVGREDEKEKLLKMLLCDEDPTGNAIGVITIWGMGGLGKTTLAQLLYNDNKVQEHFDLKAWAYVSDDFSVLKVTKNLVESITSKVCDGKNLDFLRVELKNSVKNKKFLIVLDDLWNEKYSDWDDLITPFHSGKRGSRIIVTTRQPRVAEITHTFPILKLNHLLDDNCWSLLSKHAFANVDPNKYPELEAIGRQIVRKCGGLPIAAKTIGGLLRSKVDTREWNKILNSNQWNIPDDDVMPALRLSYLYLPSHLKKCFAYCSIFPKDLVLEKKKLVLLWMAEGIVQQQSHGEKTFEIEAENYFNELLSRSFFQQYGGNPKKFVMHDLINDLAKFVSGKSYAQFEENEVSKSIRHLSFSLKKYSRSKECESFCRTNSLRTLLSQNEFKDWSATCVLTRKVLHDLLTKLKCLRVLSLPRYENIVEVPISIGNLQLLRYLNFSYTSIRRLPDVAFTLYNLQTLLLSNCVFY 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1682g00002 634 PANTHER DISEASE RESISTANCE PROTEIN RP 42 631 IPR044974 GO:0006952
Pral1682g00002 634 FunFam Probable disease resistance protein At1g61300 152 321 - -
Pral1682g00002 634 Gene3D - 330 411 IPR042197 -
Pral1682g00002 634 FunFam Probable disease resistance protein At1g63360 413 500 - -
Pral1682g00002 634 SUPERFAMILY L domain-like 489 632 - -
Pral1682g00002 634 PRINTS Disease resistance protein signature 366 380 - -
Pral1682g00002 634 PRINTS Disease resistance protein signature 269 283 - -
Pral1682g00002 634 PRINTS Disease resistance protein signature 618 634 - -
Pral1682g00002 634 PRINTS Disease resistance protein signature 196 211 - -
Pral1682g00002 634 Pfam NB-ARC domain 172 395 IPR002182 GO:0043531
Pral1682g00002 634 Coils Coil 69 93 - -
Pral1682g00002 634 Gene3D - 151 322 IPR027417 -
Pral1682g00002 634 Gene3D Ribonuclease Inhibitor 503 634 IPR032675 -
Pral1682g00002 634 Pfam Rx N-terminal domain 12 104 IPR041118 -
Pral1682g00002 634 Gene3D - 33 124 - -
Pral1682g00002 634 Gene3D - 412 500 IPR036388 -
Pral1682g00002 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 427 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1682g00002 Pral-Chr1682 40934 43138 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1682g00002 169 392 WRKY Transcription Factor Family AT4G12020 27.642 4.50e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1682g00002 - - pcin:129317775 922.924