Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1680g00003 ATGACTCTAGGTTCGATTGTGCTGGTTTTGCTGTCGGTCGCGTGCGTTTACACATGTCGCTACTTCAAGAAGAAAGGAGATGATCAAGCAAGACTTGAGAAGTTTTTGAAGAATTACGAGGCACTTAAACCTACCAGATTCTCTTTCGCTGATATCAAAAGAATCACACACAGTTTCAAGGATAAATTAGGTGAAGGTTCTCACGGAACAGTCTTTAAAGGTAAGCTATCTGCTGAAATTCAAGTTGCTGTCAAAGTACTCAATAATTCAGATAATGATGGACAAGATTTCATTAACGAAATGGGGACAATGGGCCAAATTCATCACATCAATGTTGTTCGTTTGTGGGGATTTTGTGCTGATGGTTTTCATCGAGCTCTTGTTTATGACTTTTTCCCAAAAGGCTCCCTCCAAAAGTTCATATTTTCCCAAGATAACAGAGAAAATTTCCTCGGGTGGTCGAAGCTGCAACAGATTGCTCTTGGCATCGCAAAGGGGATTGAATATCTTCACCAAGGCTGTGATTATAGAATTCTCCATTTTGATATCAATCCTCACAATGTGTTGTTAGATGACAAGTTCACTCCTAAAATTTCTGATTTTGGTCTAGCTAAATTGTGTTCTAAAAATCAAAGTATGGTGTCAATGACAATAGCAAGAGGAACTTTAGGATATATTGCACCTGAAGTCTTTTTTCCAAATTTTGGCCATGTGTCATACAAATCAGATATTTATAGTTATGGGATGCTACTCTTGGAAATGATCAGCGGAAGGAAAAATGTTGATACAAACAAAGAAACTTTTCAAGTTCTATATCCAGAATGGATTCATAATTTGATCAAAGGAGAAAATATGAGTATTTCTATAGAAGATGAAGTTGACATTAGAATTGCTAAAAAACTGGCAATTGTAGGACTTTGGTGCATTCAGTGGCAATCAATAAATCGTCCATCCATGAAAACAGTGGTACAGATGTTGGAAGGAGAAGTAGATAAACTAAAGGTGCCTCCAACTCTAGTTGACTTGACTGCTTCAACCAATACAAGTACTATTATTCCTGCAAGGCATTTGAATTTAGAGTCATGA 1086 0.3711 MTLGSIVLVLLSVACVYTCRYFKKKGDDQARLEKFLKNYEALKPTRFSFADIKRITHSFKDKLGEGSHGTVFKGKLSAEIQVAVKVLNNSDNDGQDFINEMGTMGQIHHINVVRLWGFCADGFHRALVYDFFPKGSLQKFIFSQDNRENFLGWSKLQQIALGIAKGIEYLHQGCDYRILHFDINPHNVLLDDKFTPKISDFGLAKLCSKNQSMVSMTIARGTLGYIAPEVFFPNFGHVSYKSDIYSYGMLLLEMISGRKNVDTNKETFQVLYPEWIHNLIKGENMSISIEDEVDIRIAKKLAIVGLWCIQWQSINRPSMKTVVQMLEGEVDKLKVPPTLVDLTASTNTSTIIPARHLNLES 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1680g00003 361 Gene3D Phosphorylase Kinase; domain 1 31 131 - -
Pral1680g00003 361 Gene3D Transferase(Phosphotransferase) domain 1 132 336 - -
Pral1680g00003 361 Pfam Protein kinase domain 60 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1680g00003 361 FunFam PR5-like receptor kinase 132 337 - -
Pral1680g00003 361 FunFam serine/threonine-protein kinase PBS1-like 25 131 - -
Pral1680g00003 361 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Pral1680g00003 361 ProSiteProfiles Protein kinase domain profile. 57 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1680g00003 361 PANTHER RUST RESISTANCE KINASE LR10-RELATED 31 339 IPR045874 GO:0004672
Pral1680g00003 361 SUPERFAMILY Protein kinase-like (PK-like) 40 327 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1680g00003 Pral-Chr1680 65529 66742 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1680g00003 3 340 Receptor kinase-like Gene Family AT1G66910 45.763 3.66e-102 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral1680g00003 Pkinase 8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1680g00003 - - ahf:112805998 528.094