Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1680g00002 ATGTTGAGTGCCGATCTTCTTGAAGAAATTGTGGAGGAGATATCGATGAGGCTTCCTGTGAAATCCCTACTTCGATGCAAATCCGTGGCGAAATCCTGGTACGCACAAATCACTAATCCATCTTTTATAACCAGACAATTTGAATGGTCTGATTCAATCACCAAAAACCGCCGCCACCAGCTGATATTTCGATTGCACAATGCCTCTCTGAAGCCTTGCATTTCTCTAATTTCCGACCAGGAACCCATCGATATAGAAGTGCCGTTTCCTGAGAAGGATGTAGAACACATATTCGTTTATGGTCAATGTAATGGGATTTTCTGTCTCTATGGGGTCTATGGAGGAGATAAAGCTGGTGAGGCCAGCTTGATTCTGTGGAATCCTGGAACAAAAGAGGTGAAGGTTCTTCCTGCATCTCAGAACCAACCCAGAGACATGGTTTATATCATATATGGGTTTGGAATTGATCCTATTACAAACGATTACAAGGTTGTTCGATTTGGGAACCTGGCTTTTGAAGGAAGAGAACAACCTCCAGTTGAGGTGTATAATCTCAGTACTGGTTCTTGGAGAACCATAGATTCTGTTGTCCCTGCTTTTCGATTGTGTTATCCAAAATGCAGGGCTTATCTGAATGGGTTATATCACTGGCTAACTGAAGATAATAATGATAAGGCCATTTTGTTCTTTGATTTTGGCAACGAGGTGTTTGGGAAGATTCAGTTGCCTCCTGAAATTGATCAATCTTATGAATCAAATGTTGCTGTGGTTGATGAGAAACTTGCTTGTGCTGCTACATATAAGATGACCAATTGTAGATATGAAATCTGGGTGATGAATGAGTATGGTGTTGAGAGTAGCTGGAGTAAGAAATTTGTTATTGGACCAAACCCAGAATTTGGATCATTTTTAGGATTTTGGGGAGATGATGAGATTCTTGTTGAAAATGAAGGTCATTTGGTTTCATATAATATTAAGAATTAG 984 0.4004 MLSADLLEEIVEEISMRLPVKSLLRCKSVAKSWYAQITNPSFITRQFEWSDSITKNRRHQLIFRLHNASLKPCISLISDQEPIDIEVPFPEKDVEHIFVYGQCNGIFCLYGVYGGDKAGEASLILWNPGTKEVKVLPASQNQPRDMVYIIYGFGIDPITNDYKVVRFGNLAFEGREQPPVEVYNLSTGSWRTIDSVVPAFRLCYPKCRAYLNGLYHWLTEDNNDKAILFFDFGNEVFGKIQLPPEIDQSYESNVAVVDEKLACAATYKMTNCRYEIWVMNEYGVESSWSKKFVIGPNPEFGSFLGFWGDDEILVENEGHLVSYNIKN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1680g00002 327 Pfam F-box associated 210 317 IPR006527 -
Pral1680g00002 327 PANTHER OS09G0372900 PROTEIN-RELATED 13 302 - -
Pral1680g00002 327 CDD F-box_AtFBW1-like 4 42 - -
Pral1680g00002 327 Gene3D - 4 42 - -
Pral1680g00002 327 NCBIfam F-box protein interaction domain 101 314 IPR017451 -
Pral1680g00002 327 Pfam F-box domain 8 42 IPR001810 GO:0005515
Pral1680g00002 327 SUPERFAMILY Galactose oxidase, central domain 104 289 IPR011043 -
Pral1680g00002 327 SUPERFAMILY F-box domain 5 67 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1680g00002 Pral-Chr1680 38727 39710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1680g00002 181 304 Carbohydrate Esterase AT1G25141 27.407 1.90e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1680g00002 - - pcin:129320976 551.592