Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1678g00003 ATGGAAGCTGAAGAGGTCGAAAGAGTTGGGAGGTTCCATTTTGTATCGAAATTGATATTATCCGCCATTTCTGGGGCTCTCACGGGATGTTTTGCCATTGCTGGAGCCATCACAGGAGCTATAGCTGGCGCATTAGCGAGTAGGGCTTCTGAGAGCGGTTTTCTCCGTGGAGCTTCACTGGGGGCCATTGCTGGAGCTATAATATCTGTCGAGGTGTTAGAAGCTTCCCGTGCCTATTGGTGTTTAGAGCAAACTGGCTCAAGGAGCTCATCATCCATGGCAGATTTCATAGAGCAACTTGTTCGTGGGAGGCTTGTAGAGGAACAATCTACACCAACTATACTCACTGCCTACAGTTGGCAGGTTGGGGTTGCTAATACAGGCTACGATGAGATCCCCGAGGTTCATAGCTTAGTTTCACCTAGAGGATTGTCTGGGGATTCGTTGAAGAAGTTACCACACCATGTTATCTTAAAGGACATGAAGACGGAGAATCTCTGCTGCACAATATGTTTGCAGGATATTGAAGTAGGAGAGGTGGCGAGGAGCTTACCTAGATGTCATCATACGTTTCACTTGAACTGTGTGGACCGATGGCTTGTCAAGAATGATTCATGTCCTGTCTGCAGACAATATGTATAG 642 0.4704 MEAEEVERVGRFHFVSKLILSAISGALTGCFAIAGAITGAIAGALASRASESGFLRGASLGAIAGAIISVEVLEASRAYWCLEQTGSRSSSSMADFIEQLVRGRLVEEQSTPTILTAYSWQVGVANTGYDEIPEVHSLVSPRGLSGDSLKKLPHHVILKDMKTENLCCTICLQDIEVGEVARSLPRCHHTFHLNCVDRWLVKNDSCPVCRQYV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1678g00003 213 ProSiteProfiles Zinc finger RING-type profile. 168 210 IPR001841 -
Pral1678g00003 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 213 IPR013083 -
Pral1678g00003 213 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 4 212 IPR044523 -
Pral1678g00003 213 SUPERFAMILY RING/U-box 149 213 - -
Pral1678g00003 213 Pfam Ring finger domain 168 210 IPR001841 -
Pral1678g00003 213 SMART ring_2 168 209 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1678g00003 Pral-Chr1678 8049 10851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1678g00003 15 213 C3H Transcription Factor Family AT1G74410 59.000 7.12e-78 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1678g00003 - - gmx:100800105 313.538