Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1676g00001 ATGCTCATGCATTCCCACAGTATGGATCCCTATCATCATCCCACCATGACACAACCTAAACCTCTCAACTCTACCCTCTCCTCTCACCCCCTTGCCCTCGCCGGAGACTCCTTCTCCGGCCGGCTCTTCTTCTTGCGAGATGTCCAGGTCTTGGAGATCCTCCTTGCTGCTATGGTCTTCATAGTCATCCATTCCATGAGACAGAGGAAACGCTATGGCTTGCCCGTTTGGCCTGTCTTTGGAATGTTACCTTCCTTGGTGTTCACGGGGCTTAGGACCAACTTGTATGAATGGGTCACCGATGTCCTGAGCCGGCAAAACTGGACGTTTCAATTCAGAGGGCCTTGGTTCAGCAGCCTCAACTGCGTCGTCACGTCTGATCCTCGCAACTTGGAGCATCTTCTCAAGACCAAGTTCCCTCTTTTTCCGAAAGGAAGTTACTTTAGGGACAATCTGAGGGACCTTCTTGGAGAAGGTATTTTCAACGCAGATGATGGGACATGGCAGAGACAGAGGAAAACGGCGAGCATTGAGTTTCATTCTGCAAAATTCAGGAACATGACCACAGAGTCATTGTTTGAGCTAGTCCATTTGAGACTGTTGCCTGTGTTGGAAGCATCGTTTGAGAAATCCACGTCCATTGACTTACAAGACATCCTATTAAGGCTTACGTTTGACAACGTGTGTATGATAGCTTTCGGTGTTGATCCAGGTTGCTTGAGCCTGAACTTGCCGGAAATCCCATTCGCTAAAGCGTTTGAAGATGCAACAGAAGCGACGGTGCTTCGCTTCGTCACGCCAACATGGGTGTGGAAAACCATGAGGTGTCTCAACCTGGGGATGGAGAGAAAGCTGAAGAAGTCGATAAAGAAGGTGGACGAATTCGCAGAGAACGTGATTAAGACAAGGAAAAAGGAGCTGGCTTTGCAGCGTGAGGAGAATACGAGGTCAGACTTGTTGACAATATTCATGGGGCTCAAGGATGAGAAAGGGGAGGCATATTCAGATAAGTTCTTGAGAGATATATGTGTGAACTTCATATTAGCAGGGAGGGACACGTCTTCAGTGGCTCTGAGCTGGTTTTTCTGGTTGCTTCATGAGAATCCCGAGGTGGAGGAGAAGATACTGCAAGAGATTTGCAAGATAGTGAATGAGAGGGAAGAAGATGAAGCAGCGAAGAAGAAGAAGGAGGGACAAGAGTTGAGATTTAGAGCGGAGGAGATTAAGAAGATGGATTATTTGCAGGCTGCTCTTTCTGAGTCACTCAGACTCTACCCTTCCGTCCCTGTGGATCACAAGGAGGTAGTTGAAGACAACACATTCCCAGATGGAACAGAGCTAAAGAAAGGCACCAAAGTCATATACGCAATTTATGCGATGGGGAGAATGGAAGGCATATGGGGAAAAGATTGCAGAGAGTTCAGGCCAGAGAGATGGCTCAGAGATGGCCATTTCATGAGTGAATCCGCTTACAAGTTCACTGCCTTCAATGGTGGTCCTCGTTTGTGCCTAGGCAAAGATTTTGCTTATTACCAGATGAAATATGTCGCTGCCAGCATCATCTATCGCTACCATGTGAGGTTGGCTCACAATCACCCTGTGCTTCCCAAGCTTGCATTAACTATGTACTTGAAGCATGGCTTGAAAGTTAGTCTTGAAAGGAGGGACGCCGCAGAGATTCGGAAACATTTCTCAGATCAGTAA 1704 0.4748 MLMHSHSMDPYHHPTMTQPKPLNSTLSSHPLALAGDSFSGRLFFLRDVQVLEILLAAMVFIVIHSMRQRKRYGLPVWPVFGMLPSLVFTGLRTNLYEWVTDVLSRQNWTFQFRGPWFSSLNCVVTSDPRNLEHLLKTKFPLFPKGSYFRDNLRDLLGEGIFNADDGTWQRQRKTASIEFHSAKFRNMTTESLFELVHLRLLPVLEASFEKSTSIDLQDILLRLTFDNVCMIAFGVDPGCLSLNLPEIPFAKAFEDATEATVLRFVTPTWVWKTMRCLNLGMERKLKKSIKKVDEFAENVIKTRKKELALQREENTRSDLLTIFMGLKDEKGEAYSDKFLRDICVNFILAGRDTSSVALSWFFWLLHENPEVEEKILQEICKIVNEREEDEAAKKKKEGQELRFRAEEIKKMDYLQAALSESLRLYPSVPVDHKEVVEDNTFPDGTELKKGTKVIYAIYAMGRMEGIWGKDCREFRPERWLRDGHFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIYRYHVRLAHNHPVLPKLALTMYLKHGLKVSLERRDAAEIRKHFSDQ 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1676g00001 567 PANTHER CYTOCHROME P450 63 550 - -
Pral1676g00001 567 CDD CYP86A 110 548 - -
Pral1676g00001 567 Gene3D Cytochrome P450 72 566 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1676g00001 567 SUPERFAMILY Cytochrome P450 73 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1676g00001 567 FunFam Cytochrome P450 65 558 - -
Pral1676g00001 567 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1676g00001 567 PRINTS P450 superfamily signature 494 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1676g00001 567 PRINTS P450 superfamily signature 503 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1676g00001 567 PRINTS P450 superfamily signature 349 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1676g00001 567 Pfam Cytochrome P450 76 546 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1676g00001 567 PRINTS E-class P450 group I signature 358 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1676g00001 567 PRINTS E-class P450 group I signature 493 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1676g00001 567 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1676g00001 567 PRINTS E-class P450 group I signature 338 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1676g00001 567 PRINTS E-class P450 group I signature 415 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1676g00001 567 PRINTS E-class P450 group I signature 503 526 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1676g00001 567 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 496 505 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1676g00001 Pral-Chr1676 2050 5114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1676g00001 39 565 Cytochrome P450 AT5G23190 74.383 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1676g00001 K15402 - gmx:100809503 867.84