Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1675g00004 ATGAAAGTTTCTCAAAAATTGTGCCCTCGGTCATTCCCTCAAATACCAAAGTCGCTTCGTCTCTGTTCTTCGATCTCAACCCGCCATTTGCGTCAATTGCAGCGGAACGCCTCTTCCTTCAACATGGAACCAGAAAAGGGCAAACAGTCTTCCCACAAAACCCCATACACTGAACTCGAGCAAGTTAACTCTGATTTCACCCTGGCAATCGCTTTGCAAGAGCAAGAGGGAACCTTCACAATGCTTGACACCATGGACAGCGAAGAAAGCAGCAATGGAGATGAAAGCGAGTCCTCTTTCGAAGACGATGAAGATGAAGATGCTGACTTTTCCGAGAGCCAAGAACTCGAATTCGGAGACCTTCAGTTTCTTGAGGGCGAAGGAAGCAATGATGAGGACATGGAAGAAGATGAGATTGATCCGGATGAAATGTCCTACGAAGAGTTGATTGAGTTGGCGGAGTTCATAGGAGAAGAGAGGAAAGGACTGTCAGCAAATGAAATCCCTTCCTGCCTGCATCCTTACACTTGCCATTTTGCAGAAAAAAAGACAGGAATAGATCGCTGTGTGATATGTCAGGTTGAATACGAAGAAGGTGAAGCACTGATGGCACTTCATTGTGAGCACCCTTATCATTCAGATTGCATCATCCAGTGGCTTCAGATTAAGAAGGTTTGTCCAATTTGTGGCTCTGAGGTCTCCACTCCAAAACTGGCTAATAAGAACCCTTGA 732 0.4563 MKVSQKLCPRSFPQIPKSLRLCSSISTRHLRQLQRNASSFNMEPEKGKQSSHKTPYTELEQVNSDFTLAIALQEQEGTFTMLDTMDSEESSNGDESESSFEDDEDEDADFSESQELEFGDLQFLEGEGSNDEDMEEDEIDPDEMSYEELIELAEFIGEERKGLSANEIPSCLHPYTCHFAEKKTGIDRCVICQVEYEEGEALMALHCEHPYHSDCIIQWLQIKKVCPICGSEVSTPKLANKNP 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1675g00004 243 ProSiteProfiles Zinc finger RING-type profile. 189 229 IPR001841 -
Pral1675g00004 243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 238 IPR013083 -
Pral1675g00004 243 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 38 135 IPR043312 -
Pral1675g00004 243 SMART ring_2 189 229 IPR001841 -
Pral1675g00004 243 MobiDBLite consensus disorder prediction 126 141 - -
Pral1675g00004 243 SUPERFAMILY RING/U-box 188 236 - -
Pral1675g00004 243 MobiDBLite consensus disorder prediction 35 55 - -
Pral1675g00004 243 MobiDBLite consensus disorder prediction 85 141 - -
Pral1675g00004 243 MobiDBLite consensus disorder prediction 88 114 - -
Pral1675g00004 243 FunFam E3 ubiquitin ligase BIG BROTHER-related 155 236 - -
Pral1675g00004 243 Pfam Ring finger domain 188 229 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1675g00004 Pral-Chr1675 19272 20448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1675g00004 136 233 C3H Transcription Factor Family AT3G63530 51.485 1.83e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1675g00004 K19045 - gmx:100526881 258.07