Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1674g00007 ATGGTGAGAACGCCTTCGTATGACAAAAGTGGACTGAAAAAAGGGACCTGGACCCCCGAGGAAGACAGCAAGCTAATTGCCTATGTTACTCGGTATGGCTGCTGGAATTGGCGCCAACTCCCCAGGTTTGCAGGACTGGCGAGGTGTGGGAAGAGTTGCAGACTGAGATGGATGAATTATCTGAGACCCAACATCAGAAGAGGCAATTACACTCCTCAAGAAGAGGACATTATCATTGAACTGCACAAACAGCTGGGCAATAGATGGTCCTCCATTGCTGCACATTTGCCCGGAAGAACCGATAACGAAATAAAGAACCACTGGCACACCAACCTGAAGAAGCGATTTCAACATAACTCGAGCGACACCCATAAATCTAAAAGGTCAGAAGATACTTCCACTTCCAAACAACACCACAGTGGTTCTTCTCACTCATCTTCTCCTCCAGAATCTGCTTCTTCCCAGATCGAAATCCTGGATTCTAGCCCATTGTCTCCCCAGTCATCATCCTCATCTGCCACGCCTTCCTCTTCCCTAAATTCAAGTCTGGAACATGACTTATCTTTCCTCGATGCTCTCCCTGAGCCTGATACCCAAGGTCTCTGGACCCACCTTAATCTGGACGACATCTTTCGCCATCCAACAGAAACAATGCCAGTGCTCTCTCCTCCTCAAACTTCATCTATTCCTCGAACCATGCTTGTGGACGATGATTTTGCTTTCCTGGATTCACTTCCCCAGGCACCATTTGACAGTTCTCTGATAGACGCACAAATGGCTGACGTGTCTTACCCAACGCAATCACAGGCACCCTTGGGCGCTGAATTAGAATATCTTTATCCCCTTTATGATCTAGATCTCTGGAGTCAAGGCACCGATTTGTATGTATGA 891 0.4747 MVRTPSYDKSGLKKGTWTPEEDSKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWMNYLRPNIRRGNYTPQEEDIIIELHKQLGNRWSSIAAHLPGRTDNEIKNHWHTNLKKRFQHNSSDTHKSKRSEDTSTSKQHHSGSSHSSSPPESASSQIEILDSSPLSPQSSSSSATPSSSLNSSLEHDLSFLDALPEPDTQGLWTHLNLDDIFRHPTETMPVLSPPQTSSIPRTMLVDDDFAFLDSLPQAPFDSSLIDAQMADVSYPTQSQAPLGAELEYLYPLYDLDLWSQGTDLYV 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1674g00007 296 MobiDBLite consensus disorder prediction 115 137 - -
Pral1674g00007 296 CDD SANT 69 112 IPR001005 -
Pral1674g00007 296 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral1674g00007 296 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pral1674g00007 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pral1674g00007 296 MobiDBLite consensus disorder prediction 115 181 - -
Pral1674g00007 296 CDD SANT 16 61 IPR001005 -
Pral1674g00007 296 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 182 - -
Pral1674g00007 296 Gene3D - 69 143 - -
Pral1674g00007 296 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral1674g00007 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pral1674g00007 296 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pral1674g00007 296 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral1674g00007 296 MobiDBLite consensus disorder prediction 138 181 - -
Pral1674g00007 296 SMART sant 66 114 IPR001005 -
Pral1674g00007 296 SMART sant 13 63 IPR001005 -
Pral1674g00007 296 FunFam MYB-related transcription factor 13 66 - -
Pral1674g00007 296 Gene3D - 6 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1674g00007 Pral-Chr1674 52553 53912 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1674g00007 1 142 MYB Transcription Factor Family AT2G31180 59.859 1.95e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral1674g00007 Myb_DNA-binding 2.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1674g00007 K09422 - gmx:100777107 266.544