Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1674g00005 ATGGACAGCATGAAGAGACCATGGTTCTGGATTTCAGTTCTCATCCTCTGCTTCTGTTTTATCATTCATTCTTCTTTTGGAGCTTTTACTTCCATCTCTGCAAATCAATCTCTTTCTGGCGATCAAACTCTGATATCCGAGGAAGGCGTCTTTGAGTTGGGATTCTTCAAGCCAGGTAATTCCTCTAATTACTACATAGGCATATGGTACAAAAAGGTCTCTCAAGAGACCTATGTTTGGGTAGCTAACAGAAACAAACCCGTCCCTCACAAACATTCCGCCAAGTTAGAAATATCGGATGGTAATTTAGTTCTCTTGGACGGGTCTCAAAAGATTGTTTGGTCAACAAACTTGACTTTTCCATCCTCAAGTCCTGTAGAAGCGGTCCTTCTTGATAGTGGGAATCTAGTTTTGAGAGATAGGTCAAATGCAACAAAAGATTTCCTTTGGCAGAGCTTTGATCATCCAACTGATACCTGGCTTCCAGGAGGTAAAATAAAATTAAATAACAGAACAAAGCAGCCTCAATATCTCACTTCATGGAAGAATAGCGAGGACCCTGCAGAAGGCCTTTTCTCTCTAGAGCTAGACCCCAAAGGAAGCACGGCCTATCTCATTCTTTGGAACAAGTCTGAACAGTATTGGACCAGTGGTTCTTGGAATGGACAAATTTTCAGTTTGGTACCAGAAATGAGGTTAAATTACATCTACAATTTCACATTCGAGACAAACGAGAACGAGAGCTATTTCACCTACACTGTGTATAATAATAGTATTATATCACGATTTGTGATGGATGTCTCGGGGCAAATCAAGCAATTTACATGGTTAGAAGCTAGCCAACAATGGAACTTGTTTTGGTCACAGCCAAGACAGCAATGTGAGGTTTATGCATTCTGTGGTGCATTTGGAATCTGTAACGAGAATTCCATGCCATCTTGTACTTGTTTACTTGGCTTTGAGCCGAAGTTCCAGAGCAATTGGACTCTGAAGGATTACTCAGGAGGCTGTGAGAGGAAAACAAAAATCCATTGTGAGGACTCCAATTCTTCGAATGGAAAAAAGGACAAGTTCCAAGAAACGCAGAACATGAAATTGCCTAAAAATTCTCTATCTGTTAGAGCAGGGAATGCAGAGGAATGCCAATCAACCTGCTTGAGCAATTGTTCATGTGCTGCTTATGGATACGATAGCAATGGGTGTTCAATTTGGCATGAAAATCTCTTAAATCTCCAACAACTCTCTCAAGATGACAGCAGTGGAGAAACTTTATATCTCAGGCTTGCAGCTTCCGAGTTTCCTGACTCTGAAAACAATAAGGGGACGACTATTGGTATTGTTGCAGGGTCGGTGGGAGGTATCGGGATTCTCCTAGCTATACTTGTGATGATAAGGCGAAGAAAGAGAATTGTTCAAACAAGAAAATCTGTAGAGGGTTCATTGATGGCATATGGGTATAGAGATTTGCAAAACGCGACGAGGAATTTCTCAGAGAAGCTAGGAGGAGGAGGTTTTGGTTCTGTGTTCAAAGGAACATTGCCAGATTCTAATGTTATAGCAGTGAAGAAGCTTGAAGGCATTGGCCAAGGTGAGAAGCAGTTTCGTACAGAAGTCAGTACAATCGGAACAGTCCAACATGTAAATTTGGTCCGACTTAGAGGGTTTTGTTCCGAAGGAGCGAGAAAACTGCTTGTCTATGATTACATGCCAAATAGTTCTTTGAATTCCCATCTGTTTCAAGAAAACAGATTTGAGATTTTGGACTGGGAAATGAGGTACCAAATTGCCCTTGGAACAGCGAGGGGATTAACTTACCTCCATGAAAAGTGTAGAGATTGTATTATACATTGTGACATCAAACCAGAAAACATTCTCCTTGATGCTGGTTTTTGTCCAAAAATTGCTGACTTCGGCCTTGCAAAGCTAGTTGGACGAGATTTTAGTAGGGTTCTTACAACCATGAGAGGAACAAGAGGCTATCTTGCTCCAGAGTGGATATCTGGGGTGGCTATCACAGCTAAAGCTGATGTTTACAGCTATGGGATGATGCTTTTTGAATTTGTGTCAGGCAGGAGAAACTCTGAGCCATCTGTAGATGGCCGAGTTAAGTTCTTCCCTACTTGGGCTACAAATGTTGTAATCCAAGGTGGAAATATGCCTAGCCTATTAGACCCAAAGTTGGAGGGAAATGCAGACATGGATGAGGTAGCACGAATACTAAAAGTTGCCGCTTGGTGTGTCCAAGATGATGAAACTCAGAGGCCATCCATGGGTCAGGTGGTTCAAATCCTTGAGGGGGTGTCGGGTATCAAGCTGCCTCCAGTTCCGAGATCCCTCAAATTATTTCTTGAAGAAGACCAGGCAAATATTGTGTTCTTCACTGATTCAAACTCGAGCTCCAACCAGAGTCACAGGTAA 2418 0.421 MDSMKRPWFWISVLILCFCFIIHSSFGAFTSISANQSLSGDQTLISEEGVFELGFFKPGNSSNYYIGIWYKKVSQETYVWVANRNKPVPHKHSAKLEISDGNLVLLDGSQKIVWSTNLTFPSSSPVEAVLLDSGNLVLRDRSNATKDFLWQSFDHPTDTWLPGGKIKLNNRTKQPQYLTSWKNSEDPAEGLFSLELDPKGSTAYLILWNKSEQYWTSGSWNGQIFSLVPEMRLNYIYNFTFETNENESYFTYTVYNNSIISRFVMDVSGQIKQFTWLEASQQWNLFWSQPRQQCEVYAFCGAFGICNENSMPSCTCLLGFEPKFQSNWTLKDYSGGCERKTKIHCEDSNSSNGKKDKFQETQNMKLPKNSLSVRAGNAEECQSTCLSNCSCAAYGYDSNGCSIWHENLLNLQQLSQDDSSGETLYLRLAASEFPDSENNKGTTIGIVAGSVGGIGILLAILVMIRRRKRIVQTRKSVEGSLMAYGYRDLQNATRNFSEKLGGGGFGSVFKGTLPDSNVIAVKKLEGIGQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGARKLLVYDYMPNSSLNSHLFQENRFEILDWEMRYQIALGTARGLTYLHEKCRDCIIHCDIKPENILLDAGFCPKIADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEPSVDGRVKFFPTWATNVVIQGGNMPSLLDPKLEGNADMDEVARILKVAAWCVQDDETQRPSMGQVVQILEGVSGIKLPPVPRSLKLFLEEDQANIVFFTDSNSSSNQSHR 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1674g00005 805 SMART ntp_6 353 428 IPR003609 -
Pral1674g00005 805 PANTHER OS07G0415500 PROTEIN 13 776 - -
Pral1674g00005 805 ProSiteProfiles PAN/Apple domain profile. 345 429 IPR003609 -
Pral1674g00005 805 ProSiteProfiles Protein kinase domain profile. 494 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1674g00005 805 Gene3D Transferase(Phosphotransferase) domain 1 569 771 - -
Pral1674g00005 805 Pfam Protein kinase domain 497 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1674g00005 805 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Pral1674g00005 805 FunFam Serine/threonine-protein kinase 569 772 - -
Pral1674g00005 805 SUPERFAMILY Hairpin loop containing domain-like 354 416 - -
Pral1674g00005 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Pral1674g00005 805 Pfam D-mannose binding lectin 77 182 IPR001480 -
Pral1674g00005 805 FunFam Serine/threonine-protein kinase 24 153 - -
Pral1674g00005 805 Pfam S-locus glycoprotein domain 215 324 IPR000858 GO:0048544
Pral1674g00005 805 CDD PAN_AP_plant 341 429 - -
Pral1674g00005 805 CDD STKc_IRAK 500 766 - -
Pral1674g00005 805 ProSitePatterns Protein kinases ATP-binding region signature. 500 523 IPR017441 GO:0005524
Pral1674g00005 805 SMART serkin_6 494 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1674g00005 805 Pfam PAN-like domain 353 410 IPR003609 -
Pral1674g00005 805 Gene3D Hepatocyte Growth Factor 349 429 - -
Pral1674g00005 805 Gene3D Phosphorylase Kinase; domain 1 459 568 - -
Pral1674g00005 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 221 IPR036426 -
Pral1674g00005 805 FunFam Serine/threonine-protein kinase 461 568 - -
Pral1674g00005 805 SUPERFAMILY Protein kinase-like (PK-like) 479 796 IPR011009 -
Pral1674g00005 805 CDD B_lectin 35 156 IPR001480 -
Pral1674g00005 805 SMART blect_4 35 156 IPR001480 -
Pral1674g00005 805 Gene3D - 28 154 IPR036426 -
Pral1674g00005 805 PIRSF SRK 2 805 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1674g00005 Pral-Chr1674 26455 29196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1674g00005 475 774 Receptor kinase-like Gene Family AT5G20050 42.722 1.47e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral1674g00005 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1674g00005 - - gmx:100305421 1197.96