Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1674g00001 ATGAAGAATTGTGAGCTGTGCAAGGCGCCGGCGAGGACCTACTGCGAATCCGACCAAGCTAGCTTGTGTTGGGAATGCGACGCTAAGGTCCACGGAGCCAACTTCTTGGTAACCAGGCACTCCAGGACCCTGCTATGCCATGCGTGTCAGTCTTTGACTCCATGGAAAGCCTCCGGTGCCAAGCTCGGAAACACCCTTTCTCTTTGCGAGAGTTGTGCCGGCGGAATGAAAGATGGTAGTGACGAGGGGGACGAGAGTGAAGGTGGCAATGACGATGACATAGACACAGAGGACGATCTCGATGACGTCGACGAAGATGAAGACGAAGGGGGTGGTGGTGACGGTGACGAGGATGGAGATAATCAGGTAGTTCCTCTGTCCTCCACACCACCTCCGCCAGCTTCAAACTCCTCGAGTAGTGAAGAGTCAATTAGCAGATGTTTTAGCAGCAATAGAGTTATTTCTGAAACGGCGAGCACACTATCGTCGAAGCGAAAGCGTGAGGACGCATCGGATCTTAATTTCCAGGATGGTTGGAAGTGGTGGTGTAATAAAGAGAGGAAAGGTGGAGAGCTAAAAAAGCAGGTGGCATGGTTGGAATGTGAAGGCGGCGAAGGAACGTCGAAGGAATCGCCGAGAGGTGGAGAGATCGGACCGGCTACCGCGAAGGGGTCCAACGATGCGAGAACGCCGGAGTCCGTTTGA 705 0.5348 MKNCELCKAPARTYCESDQASLCWECDAKVHGANFLVTRHSRTLLCHACQSLTPWKASGAKLGNTLSLCESCAGGMKDGSDEGDESEGGNDDDIDTEDDLDDVDEDEDEGGGGDGDEDGDNQVVPLSSTPPPPASNSSSSEESISRCFSSNRVISETASTLSSKRKREDASDLNFQDGWKWWCNKERKGGELKKQVAWLECEGGEGTSKESPRGGEIGPATAKGSNDARTPESV 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1674g00001 234 MobiDBLite consensus disorder prediction 77 151 - -
Pral1674g00001 234 MobiDBLite consensus disorder prediction 133 151 - -
Pral1674g00001 234 CDD Bbox1_BBX-like 4 45 - -
Pral1674g00001 234 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Pral1674g00001 234 MobiDBLite consensus disorder prediction 84 116 - -
Pral1674g00001 234 SMART bboxneu5 1 45 IPR000315 GO:0008270
Pral1674g00001 234 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 169 - -
Pral1674g00001 234 MobiDBLite consensus disorder prediction 203 234 - -
Pral1674g00001 234 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1674g00001 Pral-Chr1674 3481 4732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1674g00001 2 110 C2C2-CO-like Transcription Factor Family AT4G27310 54.464 4.38e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral1674g00001 zf-B_box 8.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1674g00001 - - qsa:O6P43_000639 183.726