Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1669g00004 ATGTTTTCGTGGTTGGCAAGGATAGTTTCTGCGTGCTTGAGGCCGGTCAGGCGGTATGCCCGCATGAGCAAGGATGACGTGGATGATCCTTCCTCGATTGAAGACACTTTGCTTTGGTATAAGGACCTCGAGAAACACTCGTGCGGCGAATTCTCTTATGCTGTGGTTCAGGCCAATGAAATTATCGAGGATCACAGCCAGGTCGAGACTGGCTCCGACGCAATGTTTATCGGAGTGTACGACGGCCACGGTGGTCCCGAAGCGTCTCTGTTCATCAGCGAACACCTTTTCCATCACCTAATGAGGATAGCTCGAGATAATGGTACTATATCTGAAGATATCCTGAGAGGTGCTGTTTCCGCGACTGAAGATGGATTTCTAACTTTTGTTCGAAGGACTTATGGTATAAAGCCATTGATGGCAGCGATCGGTTCCTGTTGTCTGGCTGGTGTTATTTGGAAAGGGACTTTATATGTCGCCAACCTTGGAGACTCTCGTGCTGTAATTGGTTCTGTAGATAGATCTAATAAGATCGTTGCTGAGCAGTTGACTAGAGAGCACAATGCTAGCAAAGAGGAGGTTCGACGTGAACTTAGGTCCTTACATCCTGAAGATTCGCAGATTGTAGTTATGAAGCATGGAACGTGGCGCATTAAGGGCATCATCCAGGTATCTAGGTCTATAGGCGATGCATATTTGAAAAGACCAGAGTTTTCTCTTGATCCTTCGTTCCCACGATTCCACCTGCCAGATCCCATCCGGCGGCCTGTGCTGACAGCCGATCCATCTATATGTTCAAGGGTCCTACAACCTAATGATAAATTCCTAATATTTGCTTCTGATGGACTTTGGGAACACTTGACAAATCAGGAAGCTGCGGAGATCGTTCATAACAATCCTCGAACGGGGATAGCAAGAAGACTGCTCAAAGCCGCCCTGAACGAGGCGGCTAGGAAGCGAGAAATGAGGTATAAAGATCTGCAGAAGGTGGAGAGGGGGATCAGGAGGTTCTTTCATGATGATATCACGGTTGTGGTTGTCTTCATCGACCACGAGATGGTTGGGAAGAATATTGCTGTGCCTGAATTGTCCATCAGGGGCTTCATTGACACAGTTGGTGCATCCAATTTTAAGGTCGTTCGGGATTGA 1149 0.4752 MFSWLARIVSACLRPVRRYARMSKDDVDDPSSIEDTLLWYKDLEKHSCGEFSYAVVQANEIIEDHSQVETGSDAMFIGVYDGHGGPEASLFISEHLFHHLMRIARDNGTISEDILRGAVSATEDGFLTFVRRTYGIKPLMAAIGSCCLAGVIWKGTLYVANLGDSRAVIGSVDRSNKIVAEQLTREHNASKEEVRRELRSLHPEDSQIVVMKHGTWRIKGIIQVSRSIGDAYLKRPEFSLDPSFPRFHLPDPIRRPVLTADPSICSRVLQPNDKFLIFASDGLWEHLTNQEAAEIVHNNPRTGIARRLLKAALNEAARKREMRYKDLQKVERGIRRFFHDDITVVVVFIDHEMVGKNIAVPELSIRGFIDTVGASNFKVVRD 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1669g00004 382 Coils Coil 180 200 - -
Pral1669g00004 382 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Pral1669g00004 382 Gene3D - 30 358 IPR036457 -
Pral1669g00004 382 ProSiteProfiles PPM-type phosphatase domain profile. 47 349 IPR001932 -
Pral1669g00004 382 Pfam Protein phosphatase 2C 67 318 IPR001932 -
Pral1669g00004 382 SUPERFAMILY PP2C-like 53 350 IPR036457 -
Pral1669g00004 382 FunFam Probable protein phosphatase 2C 42 41 357 - -
Pral1669g00004 382 PANTHER PROTEIN PHOSPHATASE 38 347 IPR015655 GO:0004722|GO:0006470
Pral1669g00004 382 SMART PP2C_4 44 347 IPR001932 -
Pral1669g00004 382 CDD PP2Cc 51 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1669g00004 Pral-Chr1669 12403 15875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1669g00004 1 379 PP2C-type Phosphatase Gene Family AT5G06750 68.462 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1669g00004 K01102 - gmx:100778238 673.315