Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1667g00005 ATGGAGAGTAGCGGGTGGAAGCCTAATGTAGAGATATCACCGAACTGTCCCAGGTGTGGGTCTTGCAACACCAAGTTCTGCTATTACAATAACTACAGCTTGACTCAACCTCGTTACTTCTGCAAGGGGTGCAGAAGGTACTGGACCAAAGGAGGATCACTCCGCAATGTCCCCGTCGGCGGTGGCTGCCGGAAGAACAGACGTGGCAGTAAGACCTCCTTCAGACAACCATCCGGGGATTCTCTTCCTCCCGAGATTTCACCTCATGGAGATAATTGTAATCGCGCAGCAAATCCATCTTCATGTAGCTCCTCAGGTGTGTCTGATGCTCCAAATATTGATCTTGCACTTGTTTATGCGAATTTCCTCAATCAAAAGCCAGATTCAACAGCACCAAGCGCAGAAGTTTTGGGTCTGCCATCAGAAGATGATAAACTTGGTGTGAGTGGGTGTTTGACAGAATCCCAATTGAGTGAGGGTAACCAAATGTACCTGTATGGGTTCAACTCTATGCCGAAATATCTGGAAGATCATGGAATTGATCAGCGTTGTAGTAGCAACAGTAGTCACGATGCTATGAATTTTGAGTTGCCGCCATTGCCAGGTGAAGAGGCGGATTTGCATGATATGATGTGGTCCGGTTCTGGCTTGCACTCCTCGCAGCTCCCTCTTTTTGGTGCTGATGCTCATGATGCCGACTTCTTATTGGATAATTGGGGCCACTTCGATTTATCCAGGCCATGA 744 0.4785 MESSGWKPNVEISPNCPRCGSCNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGSKTSFRQPSGDSLPPEISPHGDNCNRAANPSSCSSSGVSDAPNIDLALVYANFLNQKPDSTAPSAEVLGLPSEDDKLGVSGCLTESQLSEGNQMYLYGFNSMPKYLEDHGIDQRCSSNSSHDAMNFELPPLPGEEADLHDMMWSGSGLHSSQLPLFGADAHDADFLLDNWGHFDLSRP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1667g00005 247 MobiDBLite consensus disorder prediction 59 90 - -
Pral1667g00005 247 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 171 IPR045174 GO:0003700|GO:0006355
Pral1667g00005 247 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 6 37 IPR017896 -
Pral1667g00005 247 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
Pral1667g00005 247 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
Pral1667g00005 247 Pfam Dof domain, zinc finger 15 68 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1667g00005 Pral-Chr1667 10962 11705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1667g00005 6 130 C2C2-Dof Transcription Factor Family AT3G52440 61.240 2.64e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral1667g00005 zf-Dof 2.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1667g00005 - - pcin:129306581 426.402