Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1665g00001 ATGCCTTCATCTTCTTCCTTTTGGACTGTATCTTCCATAAACCTTCAATTCTTCACCAGAATCAGACGTTTTCTTCAATCCAAATCTTCTCGGAAGCGCAACCAAAAGTCCGATCAATTTCGCGTATCAAAATCCAAATCAGAGAGCAACGACAAGAAGAATGAGAAGGCAGAGGTTGAAAAGCTTGAAACGATTAAAGTTATGGAGAAACAGAGTGAGAGTATTGAGGAGGAGGAGGAGGAGAAGGAAGAGTTTTGTGAGATTTTGCTGCAGCGGTCTGTGAAGAAGCTCCACTTTGGTGATTGGGAGGAGAAGGAGATTGCAGCGAAAGAGATTGAAACTATGGCGAAACGCGATGTCAGGGCTCGCAAGCTGATCATTGAGCTCGGCGTGGTGCCGGTGCTCGTCTCTATGGTGGCTTCCGATGCATCCAGCCGCCGGACTTCTGCCGTCATGGCGTTGATTCAGCTCGCTGATGGTAGCTTCACGAACAAGGCCATGATAGTGGAGGCAGGAATATTATCCAAATTACCTAAGAGGACTGACCTTATGGACGAATCAACAAGAAGTCAAATTGCAGAGTTGCTTCTGTCATTATCATCTTTGGCAACCACACAATTCCCTTTTGCATCACTGGACTTTCTCCCATTTCTCAGAGACATTCTGCGGTCAAACTCAAGCTTTGACACAAAAGAGTTATGCCTAGGAGCCTTATTCAATCTCTCAACTGTCTTAGAGAATGCAGGGCCCTTGGTTTCTGGTGGGTTTGTCCCTATTCTTTTAGAACTTTCCTCAGAAAAACAAGTTTCTGAGAAGGCTCTGGCCTCTCTGGGAAACTTAATTGTTACACTGATGGGGAAGAAAGCAATAGAAGAAAGCTCAATGGTGCCAGAGAGCTTGATAGATATTTTGTCGTGGGAAGATAAGCCAAAATGTCAAGAGATTTCTGCTTATATTTTGATGATTCTTGCTCATCAAAGCTCATCACAGAGACAGAAAATGGCCAACGCAGGGATTGTCCATGTGCTTCTTGAAGTGGTTCTCCTAGGAAGCACTTTGGCTCAGAAGAGAGCTTCAAAACTCTTGCAATGGTTTAAGGATGAAAGGCAAGTGAGAATGGGCCCACATTCGGGCCCACAAACATCCAGAACAGTCATGTCCATGGGTTCACCTATGAATGAAATGGAAGCAAGAGAAGGAAAGAGAATGATGAAGAGTTTGGTCAAAGAGAGTTTATATAGGAATATGGAAACAATTACAGAGAGGGCAAATATTGCTGCTGCAGAATCTTCTTCTAAGCTCAAGTCTTTAATAATCAGCACAAGTTCCAAGAGTTTGCCTTACTGA 1347 0.438 MPSSSSFWTVSSINLQFFTRIRRFLQSKSSRKRNQKSDQFRVSKSKSESNDKKNEKAEVEKLETIKVMEKQSESIEEEEEEKEEFCEILLQRSVKKLHFGDWEEKEIAAKEIETMAKRDVRARKLIIELGVVPVLVSMVASDASSRRTSAVMALIQLADGSFTNKAMIVEAGILSKLPKRTDLMDESTRSQIAELLLSLSSLATTQFPFASLDFLPFLRDILRSNSSFDTKELCLGALFNLSTVLENAGPLVSGGFVPILLELSSEKQVSEKALASLGNLIVTLMGKKAIEESSMVPESLIDILSWEDKPKCQEISAYILMILAHQSSSQRQKMANAGIVHVLLEVVLLGSTLAQKRASKLLQWFKDERQVRMGPHSGPQTSRTVMSMGSPMNEMEAREGKRMMKSLVKESLYRNMETITERANIAAAESSSKLKSLIISTSSKSLPY 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1665g00001 448 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 6 448 - -
Pral1665g00001 448 SMART arm_5 244 282 IPR000225 GO:0005515
Pral1665g00001 448 SMART arm_5 160 201 IPR000225 GO:0005515
Pral1665g00001 448 SMART arm_5 119 159 IPR000225 GO:0005515
Pral1665g00001 448 SMART arm_5 202 243 IPR000225 GO:0005515
Pral1665g00001 448 Coils Coil 68 88 - -
Pral1665g00001 448 MobiDBLite consensus disorder prediction 31 60 - -
Pral1665g00001 448 Gene3D - 21 372 IPR011989 -
Pral1665g00001 448 SUPERFAMILY ARM repeat 90 365 IPR016024 -
Pral1665g00001 448 MobiDBLite consensus disorder prediction 27 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1665g00001 Pral-Chr1665 14213 18203 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1665g00001 96 363 U-box Gene Family AT3G46510 28.571 4.33e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1665g00001 - - gmx:100813828 546.199