Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1661g00001 ATGAAAAAGTTGAGAAAGTCTGAGATGCTCAGTAGGGGGCAGGTTGAACATGTTAGAGCTGAGCGGAACTTATTAGCAGAAGTTGCGAGTCATTGCATTGTGAAACTCTATTACTCCTTTCAGGATGCTGATTATTTATATCTGATAATGGAATATTTACCGGGTGGTGATTTAATGACTTTGCTGATTAGAGAAGAAACCTTGACTGAAAGTGTGGCTAGATTTTACATCGCTCAAAGCGTTTTAGCCATAGAATCTATTCATAGACATCATTACATTCATCGTGATATAAAACCTGACAACCTTCTTTTGGACAAAAATGGTCATATGAAACTCTCTGATTTTGGTCTTTGCAAGCCACTTGATTGCACAAATTTATCATCAATAAATGAGGGCGAAGTCTTAGATGACGAGAACTTGAGTGATACCATGGACATTGATGAATCCTTACCAAATTCTAAATGTGGACGGCGCTGGAAAAGTCCCCTTGAACAACTTCAGCACTGGCAAATAAATAGGAGGAAGTTGGCATTTTCCACAGTTGGAACTCCAGACTATATTGCTCCTGAAGTGTTGCTTAAAAAGGGATATGGTGTGGAGTGTGACTGGTGGTCTCTTGGTGCTATCATGTATGAGATGCTTGTTGGTTATCCCCCGTTTTACTCTGATGATCCAGTAACAACATGTAGAAAGATTGTACATTGGAAACATCATTTAAAATTTCCAGAGGAGGCAAGGTTGACACCTGAGGCAATGAATCTAATTTGTAGGTTGCTCTGTGATGCTGACCGAAGACTTGGAACTAGAGGGGCAGATGAAATTAAAGCACATCCTTGGTTCAAAGATGTTGTATGGGATAAACTCTACGAAATGGAAGCAGCATTCAAACCACAAGTCAATGGAGAGCTTGACACACAGAATTTTATGAAATTTGATGAGGTTGAGCAACCAAAACCAACTAGAATTGGATCTGGTCCCATCAGAAAGATGCTATTGACTCCTCAAGATCTTAGCTTTGTTGGTTATACATATAAGAATTTTGATGCTGTCAAAGGCATGCATCATACTATGGATAAGGGGATGAGGAGCATGTCATCACCTATTCCACCAGTCACTGAATCTCCACAGAGTGATTCTGGAATAGACTATTCTTCCGGATTCTCCAGCCGGTAG 1173 0.4007 MKKLRKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDADYLYLIMEYLPGGDLMTLLIREETLTESVARFYIAQSVLAIESIHRHHYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCTNLSSINEGEVLDDENLSDTMDIDESLPNSKCGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKHHLKFPEEARLTPEAMNLICRLLCDADRRLGTRGADEIKAHPWFKDVVWDKLYEMEAAFKPQVNGELDTQNFMKFDEVEQPKPTRIGSGPIRKMLLTPQDLSFVGYTYKNFDAVKGMHHTMDKGMRSMSSPIPPVTESPQSDSGIDYSSGFSSR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1661g00001 390 SMART serkin_6 1 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1661g00001 390 Gene3D Phosphorylase Kinase; domain 1 299 309 - -
Pral1661g00001 390 Gene3D Transferase(Phosphotransferase) domain 1 179 298 - -
Pral1661g00001 390 Pfam Protein kinase domain 173 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1661g00001 390 Pfam Protein kinase domain 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1661g00001 390 Gene3D Phosphorylase Kinase; domain 1 1 56 - -
Pral1661g00001 390 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 330 - -
Pral1661g00001 390 FunFam Non-specific serine/threonine protein kinase 57 124 - -
Pral1661g00001 390 ProSiteProfiles AGC-kinase C-terminal domain profile. 281 354 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral1661g00001 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672|GO:0006468
Pral1661g00001 390 MobiDBLite consensus disorder prediction 358 390 - -
Pral1661g00001 390 ProSiteProfiles Protein kinase domain profile. 1 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1661g00001 390 Gene3D Transferase(Phosphotransferase) domain 1 57 124 - -
Pral1661g00001 390 SUPERFAMILY Protein kinase-like (PK-like) 1 340 IPR011009 -
Pral1661g00001 390 FunFam Non-specific serine/threonine protein kinase 299 309 - -
Pral1661g00001 390 MobiDBLite consensus disorder prediction 367 390 - -
Pral1661g00001 390 SMART pkinase_C_6 281 346 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral1661g00001 390 FunFam Non-specific serine/threonine protein kinase 179 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1661g00001 Pral-Chr1661 1676 9749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1661g00001 1 384 AGC Kinase Gene Family AT2G19400 77.202 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pral1661g00001 Pkinase 1.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1661g00001 K08790 - cave:132165385 681.789