Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1659g00006 ATGGCTATACCCAATATCTTCACCGTCCTTCTCTTGCTTCCTCTTCATTTGGCTTTTGGAAACTCAACTTTGAATTTAACTCTCTACGCCAGTGATCATAACTCTTCATGGCTCTCACCGTCCAAAGAATTTGCTTTTGGATTTCACCCAATCAACAACAGCACAAGGCTCTTCTTGCTTGCCATCTGGTTCGACAAAATACCTGCCAAGACTGTTGTCTGGAGTGCAGACATCGCAGATCCAGTACCACTGGGATCGAGGGTTCACCTCACATCAACGGGTCTCACACTTACTAACCCCCAAGGTCAAGTGATGTGGGCAATCAAACCAGAAGAAGATGTGTCCTATGGAGCAGTGCTTGATACCGGAAATTTTGTTCTGGCATCCTCCAGCTCTTATTTGTGGCAAAGTTTTGACAATCCTATTGATACGCTCTTACCTGCACAAACTTTGGATGTGAACAGTAAGTTATCTTCTCGATTGTCGTCGGTCAATTACACAAAGGGAAGATTTGAGCTTTATTTTGATAGTGGAAATCTCTCCTTAAGTCAAATTGGGTGGCCATCTGAATCTCATTACGACAAATATTTGAGTATTGGCACGAGTTCTAATGACTCTGCCTCACAACTAGTCTTCAATTCGTCGGGATATATTTATGTGAAGACAAAGAGTGGAGATCAAAAAGCTCTTGGGTTGAGTAATTCCAGTCTTTCTGTTGGAAGATATTATTACAGGGCTACACTTGATCCTTATGGAGTCTTCTCGTTGTATTCCCATCCCAAGGAACCCAGTGAAGATCAAGTTTGGTCAATTGAGGGGTACGTTCCTGATAACATTTGTACTGCGATATTTAGTGATTTGGGTGGTGGTTGTTGTGGCTATAATAGCTACTGCTCTTGGGATGACAACAACAAGAGACCAAATTGTACCTGTCCAAAAGGATATTTCTTGGTAGATCCAAATGACAAATTCGGAGGATGCCAACCAGGTTTCTCGCTTGGTTGTGGAGCTGATGATGCTCGATCACGAGAAAATCCAGAAGAGGTATACCGTATGGAGCCTTTGCAAAGTGTGAATTGGCCTCTTGGAGATTATGAAAGGTTGATCAATTTTACCCAGGATGAATGTATAAAATCTTGCTTGCATGATTGTAATTGTGCAGTTGCTATCACTGGAAAGGATTGTTGGAAGAAAAATTTACCCGTTTCTAACGGAAGATTATCTCTAAGTAAGGTTGAAACAATGGCATTCTTGAAAATAAGAATTCAACCACTGGGTAATCTTAATCCTTCTCTGCAAAAGGAATATCAGGTCCAACCTGCTTTGTTAGGGTCGCTTATTGGCTCCCTTGTTCTTAGTACTCTATTGGTAGCCGCTTTGGTTTTGATTATTCTCTTAAAGCCGAAAAAGACCACTCGTGTTACAAGCCTTGTCGAAACAAATATGCATTCTTTCTCATACAAAGTACTGAAGGAGGCAACAAATGAGTTCAACGAAGAAGTAGGAAGAGGTTCCTTTGGCATTGTGTACAAAGGCGTCCTCAGATCAGTAACAAAAACTGTTGTCGCAGTGAAAAGATTGGATAGATTGTCTCAAGAACGAGAAAAGGAATTTAGGAATGAGTTGAGAGCCATTGGAAACACATGCCACAAAAATCTGGTTCGGCTGATTGGGTTCTGTGATGAGGGAGTTCATAGACTTTTGGTGTACGAGTTCATGAGCAATGGTACTCTTGCTGATATTCTCTTTGGAAAATCCAAACCCGACTGGAATTTAAGGGTTAACTTTGCTTTGGAAATTGCAAGAGGTTTGCTTTACTTACATGAAGAGTGCGACACTCCTGTCATCCATTGCGATATTAAACCTCAAAATATACTGATAGATGCACATCTGAGGGCAAAAATCTCAGATTTGGGCTAG 1920 0.4125 MAIPNIFTVLLLLPLHLAFGNSTLNLTLYASDHNSSWLSPSKEFAFGFHPINNSTRLFLLAIWFDKIPAKTVVWSADIADPVPLGSRVHLTSTGLTLTNPQGQVMWAIKPEEDVSYGAVLDTGNFVLASSSSYLWQSFDNPIDTLLPAQTLDVNSKLSSRLSSVNYTKGRFELYFDSGNLSLSQIGWPSESHYDKYLSIGTSSNDSASQLVFNSSGYIYVKTKSGDQKALGLSNSSLSVGRYYYRATLDPYGVFSLYSHPKEPSEDQVWSIEGYVPDNICTAIFSDLGGGCCGYNSYCSWDDNNKRPNCTCPKGYFLVDPNDKFGGCQPGFSLGCGADDARSRENPEEVYRMEPLQSVNWPLGDYERLINFTQDECIKSCLHDCNCAVAITGKDCWKKNLPVSNGRLSLSKVETMAFLKIRIQPLGNLNPSLQKEYQVQPALLGSLIGSLVLSTLLVAALVLIILLKPKKTTRVTSLVETNMHSFSYKVLKEATNEFNEEVGRGSFGIVYKGVLRSVTKTVVAVKRLDRLSQEREKEFRNELRAIGNTCHKNLVRLIGFCDEGVHRLLVYEFMSNGTLADILFGKSKPDWNLRVNFALEIARGLLYLHEECDTPVIHCDIKPQNILIDAHLRAKISDLG 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1659g00006 639 Gene3D Transferase(Phosphotransferase) domain 1 573 639 - -
Pral1659g00006 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Pral1659g00006 639 Pfam Protein kinase domain 497 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1659g00006 639 FunFam Serine/threonine-protein kinase 20 140 - -
Pral1659g00006 639 ProSitePatterns Protein kinases ATP-binding region signature. 501 525 IPR017441 GO:0005524
Pral1659g00006 639 Pfam D-mannose binding lectin 71 157 IPR001480 -
Pral1659g00006 639 ProSiteProfiles Bulb-type lectin domain profile. 23 140 IPR001480 -
Pral1659g00006 639 SMART serkin_6 495 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1659g00006 639 Gene3D - 142 276 IPR036426 -
Pral1659g00006 639 Gene3D Phosphorylase Kinase; domain 1 462 572 - -
Pral1659g00006 639 ProSiteProfiles Protein kinase domain profile. 495 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1659g00006 639 SUPERFAMILY Protein kinase-like (PK-like) 471 639 IPR011009 -
Pral1659g00006 639 FunFam S-receptor-like serine/threonine-protein kinase 466 572 - -
Pral1659g00006 639 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 26 639 - -
Pral1659g00006 639 Gene3D - 22 140 IPR036426 -
Pral1659g00006 639 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 163 IPR036426 -
Pral1659g00006 639 SMART blect_4 25 141 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1659g00006 Pral-Chr1659 68958 70877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1659g00006 475 639 Receptor kinase-like Gene Family AT5G01950 48.521 9.10e-40 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral1659g00006 Pkinase 2.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1659g00006 - - gmx:100775269 666.766