Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1659g00005 ATGGGTAGTGGCTGCTGTGGCTACAATAGCTACTGCTCCTGGGATGACGTCAACAAGAGGCCAACTTGTACGTGTCCAAAAGGATATTTCTTGGTAGATCCAAACGACAAATTTGGAGGATGCCAACCTCGGTTTTCCCTTGGTTGTGGAGCTGATGATGCTCGATCACGAGAGAATCCAGAAGAGGTATATCATATGGAGACTTTGCAAAGTGTGGTTTGGTCTCTTGGAGATTATGAAAGGTTGATCAATTATACCAATGATGAATGTATAAAATCTTGCTTGCATGATTGTAATTGTGCAGTTGCCATCTCTAATGCTCGAGCGGATTGTTGGAAGAAAAGATTACCCGTTTCTAACGGAAGATTCTCTATAAGTGAGGTTGGAACAATAGCAATCTTGAAAATAAGAATTCAAGCACTGGGTAATCTCAATCCTTCTCCGCAAAAGGAATATCGGGTCCAACCTACTTTGTTAGGGTTGCTTATTGGCTCCCTTGTTCTAAGTACTCTATTCATAGCAGCTTTGGTTTCGATCATTCTCTTAAAGCCCAAAAAGACTACTCGTGTTACAAGCCTTGTCGAAACAAATATGCATTCTTTCTCATATGAAGTACTGAAGGAGGCAACAAATGAGTTCAACGAAGAAGTAGGAAGAGGTTCCTTTGGCATTGTGTACAAAGGCGTCCTCAAATCAGTAACAAATACTGTTGTTGCAGTGAAAAGATTAGACAGATTGGCTCAAGAACGAGAGAAGGAATTTAGGAATGAGTTGAGTGCTATTGGAAACACATGCCACAAAAATCTGGTTCGGCTGATTGGGTTCTGTGACGAGGGAGTTCATAGACTTCTGGTGTACGAGTTCATGAGCAATGGTACTCTCGCAGATATTCTCTTTGGAAAATTCAAACCTGAGTGGAATTTAAGGGTTAACCTTGCTTTGGGAATTGCAAGAGGTTTGCTTTACTTACATGAAGAGTGCGACACTCCTGTCATCCATTGCGATATTAAACCTCAAAATATACTGATAGATGCACATCTGAGGGCAAAAATCTCAGATTTTGGGCTCGCCAAGTTGTTATCTTTTGATCAGAGTCGAACCCAGACAATGATAAGAGGAACTAGAGGATATGTAGCACCAGAATGGTTCAAAAATGTTCCTGTAACTCCCAAGGTTGATGTCTACAGCTATGGTGTGATGCTGCTAGAGATGATTTGTTGCAGAAGAAATGTGGAAATGGATATGGATAAAGAGGAGGAAGGAGAGGCAATACTGACAGACTGGGCTTATGATTGCTATGTGGAGGGCAGAATAGACATTCTCGTAAAGAACGTTGAGGAGGCCATGGCCGACAGAAGGTTGAAGAAGTGGGTGATGATAGCGCTGTTGTGCATCCAAGAGAATCCTGAAGTGAGGCCTACCATGCAGACAGTGACGCAAATGTTAAAAGGCTTCGTTGACATTCCGAATCCACAGCCGCCTTCATTCTACACGCACGTTTGA 1503 0.4238 MGSGCCGYNSYCSWDDVNKRPTCTCPKGYFLVDPNDKFGGCQPRFSLGCGADDARSRENPEEVYHMETLQSVVWSLGDYERLINYTNDECIKSCLHDCNCAVAISNARADCWKKRLPVSNGRFSISEVGTIAILKIRIQALGNLNPSPQKEYRVQPTLLGLLIGSLVLSTLFIAALVSIILLKPKKTTRVTSLVETNMHSFSYEVLKEATNEFNEEVGRGSFGIVYKGVLKSVTNTVVAVKRLDRLAQEREKEFRNELSAIGNTCHKNLVRLIGFCDEGVHRLLVYEFMSNGTLADILFGKFKPEWNLRVNLALGIARGLLYLHEECDTPVIHCDIKPQNILIDAHLRAKISDFGLAKLLSFDQSRTQTMIRGTRGYVAPEWFKNVPVTPKVDVYSYGVMLLEMICCRRNVEMDMDKEEEGEAILTDWAYDCYVEGRIDILVKNVEEAMADRRLKKWVMIALLCIQENPEVRPTMQTVTQMLKGFVDIPNPQPPSFYTHV 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1659g00005 500 ProSitePatterns Protein kinases ATP-binding region signature. 217 241 IPR017441 GO:0005524
Pral1659g00005 500 CDD STKc_IRAK 217 485 - -
Pral1659g00005 500 Gene3D Transferase(Phosphotransferase) domain 1 289 490 - -
Pral1659g00005 500 Pfam Protein kinase domain 213 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1659g00005 500 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 493 - -
Pral1659g00005 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 331 343 IPR008271 GO:0004672|GO:0006468
Pral1659g00005 500 SUPERFAMILY Protein kinase-like (PK-like) 187 482 IPR011009 -
Pral1659g00005 500 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 289 490 - -
Pral1659g00005 500 Gene3D Phosphorylase Kinase; domain 1 177 288 - -
Pral1659g00005 500 ProSiteProfiles Protein kinase domain profile. 211 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1659g00005 500 FunFam S-receptor-like serine/threonine-protein kinase 182 288 - -
Pral1659g00005 500 SMART serkin_6 211 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1659g00005 Pral-Chr1659 47968 49470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1659g00005 157 489 Receptor kinase-like Gene Family AT3G53380 37.901 3.32e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral1659g00005 Pkinase 3.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1659g00005 - - lja:Lj2g3v1989170.1 632.484