Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1654g00007 GGTACAAAAGTGAATATGATCATGACAGATTACTGCATGCCTGGGATGAGCGGTTATGATTTGCTTAAACGGCTCAAGGGATCTCCTTGGAAAGACATACCCGTCGTCATTATGTCATCAGAAAACGTGCCTTCAAGAATCAGCATGTGCCTGGAAGGAGGAGCAGAGGAGTTTCTCTTGAAGCCTCTTCAGTTATCAGATTTGGAGAAGCTCCAACCCTACTTCCTGAAACTACCCGACAATTCCTGCGAAGGAGAATGCATATCTACCGACAATAGCTATAATAACTGTAATAGTATTAGCAAACGGAAGGCGACGTCACCGGAACCTAGGGAGAGATCAAGATCCAAGATGAAAGAATTAGAGGTTGTGTGA 375 0.4427 GTKVNMIMTDYCMPGMSGYDLLKRLKGSPWKDIPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLEKLQPYFLKLPDNSCEGECISTDNSYNNCNSISKRKATSPEPRERSRSKMKELEVV 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1654g00007 124 MobiDBLite consensus disorder prediction 105 124 - -
Pral1654g00007 124 ProSiteProfiles Response regulatory domain profile. 1 76 IPR001789 GO:0000160
Pral1654g00007 124 MobiDBLite consensus disorder prediction 98 124 - -
Pral1654g00007 124 Gene3D - 1 119 - -
Pral1654g00007 124 Pfam Response regulator receiver domain 3 70 IPR001789 GO:0000160
Pral1654g00007 124 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 101 IPR045279 GO:0009736
Pral1654g00007 124 SUPERFAMILY CheY-like 3 71 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1654g00007 Pral-Chr1654 32140 33407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1654g00007 2 96 Response Regulator Gene Family AT3G57040 59.375 2.48e-35 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral1654g00007 Response_reg 2.3e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1654g00007 K14492 - gmx:100801334 189.889