Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral1654g00006 | ATGGCTGCTCTCGCTTCTTCTCCTTTCATCATCCCCTGCCGCACCACACCCTCCTTCCCACTTTCTTCTTCCTCTTCTACCTCCCTCTCTTCTCTCAAATGCTTAACATCCTCTTCTCCCATTTCTCACCTCTTTTTTAATCAGGCTCAGCGAAGAGCACAGGTCCGTTTATCAAATGGAGGATATGGCACAGTGTCTGCGCCCAAATCATTCGCGTCTAATCCTGATCAGCTGAGGAGTGCAAGAGAAGACATTAGACAGCTGCTCAAGACTAAGTTCTGCCATCCAATTCTGATCCGCTTGGGATGGCATGATGCTGGTACTTACAATAAAAGTATTGAGGAGTGGCCACAAAGAGGTGGAGCTAACGGGAGCTTAAGATTTGAAATTGAACTGAAACATGCAGCCAATGCCGGGCTTGTTAATGCATTGAAACTTCTACAGCCAATCAAAGACAAGTACTCTGGTCTGACATATGCAGATTTATTTCAGCTGGCTGCTGCTACAGCTGTGGAGGAGGCGGGTGGACCAAAAATCCCTATGAAGTATGGAAGACTTGATGTCTCAGGACCTGAACAGTGTCCTGAAGAAGGCAGACTTCCTGATGCGGGCCCCCCCTCACCTGCTGATCATTTACGGCAAGTTTTTTACAGAATGGGTTTGAATGACAGGGAAATAGTTGTACTATCTGGTGCCCACACACTGGGGCGGTCTCGACCACAGCGTAGTGGCTGGGGCAAGCCAGAGACCAAGTATACGAAAGATGGACCAGGAGAACCTGGGGGGCAATCCTGGACAGTGCAATGGTTGAAGTTTGACAACTCTTACTTCAAGGACGTCAAAGAAAGAAAGGATGAAGAACTATTGGTCTTGCCAACCGATGCTGTTCTTTTTGAGGATCCGCCTTTTAAGGTCTATGCAGAGAAATATGCTGAAGATCAGGAAGCGTTCTTTAAAGATTATGCTGAAGCCCACGCCAAACTTAGCAATCTTGGAGCCAAATTTGATCCTCCGGAGGGTATTGTCATCGATAGCGGTTCTCCAAAACCTGAGCCAGAGAAGTTTGAAGCAGCGAAATACTCGACTGGAAAGAGAGAGCTGTCAGATGCTATGAAACAGAAGATTCGGGCCGAGTACCAGGCAGTTGGCGGGAGCCCAGATAAGCCTCTACAGTCTAACTATTTTCTAAATATCATGATTATCATTGCCGTTTTGGCATTTGTGACATCGCTGCTCGGAAACTAG | 1245 | 0.4723 | MAALASSPFIIPCRTTPSFPLSSSSSTSLSSLKCLTSSSPISHLFFNQAQRRAQVRLSNGGYGTVSAPKSFASNPDQLRSAREDIRQLLKTKFCHPILIRLGWHDAGTYNKSIEEWPQRGGANGSLRFEIELKHAANAGLVNALKLLQPIKDKYSGLTYADLFQLAAATAVEEAGGPKIPMKYGRLDVSGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDREIVVLSGAHTLGRSRPQRSGWGKPETKYTKDGPGEPGGQSWTVQWLKFDNSYFKDVKERKDEELLVLPTDAVLFEDPPFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDSGSPKPEPEKFEAAKYSTGKRELSDAMKQKIRAEYQAVGGSPDKPLQSNYFLNIMIIIAVLAFVTSLLGN | 414 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral1654g00006 | 414 | PANTHER | THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED | 66 | 336 | IPR044831 | GO:0004601|GO:0034599 | |
| Pral1654g00006 | 414 | Gene3D | Peroxidase, domain 2 | 203 | 326 | - | - | |
| Pral1654g00006 | 414 | MobiDBLite | consensus disorder prediction | 190 | 209 | - | - | |
| Pral1654g00006 | 414 | FunFam | L-ascorbate peroxidase S chloroplastic/mitochondrial | 81 | 205 | - | - | |
| Pral1654g00006 | 414 | PRINTS | Plant ascorbate peroxidase signature | 156 | 174 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
| Pral1654g00006 | 414 | PRINTS | Plant ascorbate peroxidase signature | 294 | 318 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
| Pral1654g00006 | 414 | PRINTS | Plant ascorbate peroxidase signature | 74 | 94 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
| Pral1654g00006 | 414 | PRINTS | Plant ascorbate peroxidase signature | 95 | 110 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
| Pral1654g00006 | 414 | PRINTS | Plant ascorbate peroxidase signature | 175 | 187 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
| Pral1654g00006 | 414 | SUPERFAMILY | Heme-dependent peroxidases | 76 | 334 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
| Pral1654g00006 | 414 | ProSiteProfiles | Plant heme peroxidase family profile. | 160 | 356 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Pral1654g00006 | 414 | FunFam | L-ascorbate peroxidase T, chloroplastic | 203 | 326 | - | - | |
| Pral1654g00006 | 414 | CDD | ascorbate_peroxidase | 66 | 336 | - | - | |
| Pral1654g00006 | 414 | PRINTS | Haem peroxidase superfamily signature | 225 | 240 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Pral1654g00006 | 414 | PRINTS | Haem peroxidase superfamily signature | 265 | 280 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Pral1654g00006 | 414 | PRINTS | Haem peroxidase superfamily signature | 175 | 187 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Pral1654g00006 | 414 | PRINTS | Haem peroxidase superfamily signature | 95 | 109 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Pral1654g00006 | 414 | PRINTS | Haem peroxidase superfamily signature | 157 | 174 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Pral1654g00006 | 414 | MobiDBLite | consensus disorder prediction | 237 | 264 | - | - | |
| Pral1654g00006 | 414 | Gene3D | - | 81 | 334 | - | - | |
| Pral1654g00006 | 414 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 225 | 235 | IPR019793 | - | |
| Pral1654g00006 | 414 | Pfam | Peroxidase | 82 | 313 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral1654g00006 | Pral-Chr1654 | 24674 | 29195 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral1654g00006 | 81 | 331 | Peroxidase | AT5G66390 | 29.492 | 9.73e-18 | 82.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral1654g00006 | K00434 | - | csav:115707840 | 675.241 |