Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1651g00012 ATGGATGGAATAGGAGGCAAAACCAGAGAGCTGTTTCATGGCCAAGCCCAGCTGTACAAACACATGTACTTCTGGATGTCTTCGGCATGTCTGAAGTGTGCTATTGAGCTTGAAATACCAGACATAATCCACAAGCATGGCCAACCCGTTTCTCTTTCTCAGTTGGTATCAGATCTCAATGTTCCACCCTCTAAAACTACCTTTGTGAAAGGGCTCATGCGCTTGCTGGCTCATAATGGCCTATTCACTATCATCAAAAGCAACAATGAAGAAGAAAGTGAGCAATCATATGATCTCACTTCAGCATCACAGCTTCTTTTGAGTGGCACAGATCATTGCTTATCTCCAATGGTTCAGTGGGCCCTTAGGCCTACTAGGCTTGAGATGTATCAACATTTGGGAAAATGGGTTCGAGGGAAGGAAAATACACTGAGAGAGACAGCATTTGGGGTAGGCTTTTATGACTTCCTTAATCAAAATCCTGCAGATTTGGCGGCCTTCCAGGAAGCAATGGCTAGTGATTCCGCATTCATGAAAGTGGCACTGAGTGACTTGAAGTCCGTTTTTGAGGGCTTCAGTTCCGTCGTTGATGTTGGTGGTGGAACTGGCACCACTGCGAAGATTATCTGTGAAGCATTTCCCAAGTTGAAATGCACAGTGCTTGATCTTCCTGAAATTGTTGCAGGTTTATCTGGAGACACCAATTTGAGTTTTGTTAGTGGGGACATGATCAAATCCATCCCTCATGCTGATGCAGTTCTGATTAAGTGGGTTTTGCACGATTGGGGGGATGATGATTGCATAAAGATACTGAAAAATGCCAAAGAGGCTATCTGTGGAAAAGACAAGGGAGGAAAAGTGATCATCATAGACACGGTGTTAAATGAAAAGCAAGACGAGCATTCACTGATGGAAACAAAACTCCTTTACAACATTATTTTGATGGCTGAGTTCAATGCAAAAGAGAGGACTGAGGGAGAATGGAAGCAACTATTCCAGAAAGCAGGCTTCACAGATTACCATATGTTTCCTATATTGGGCTTTAGGTCTCTCATTGTGCTTCATCCTTAG 1071 0.4342 MDGIGGKTRELFHGQAQLYKHMYFWMSSACLKCAIELEIPDIIHKHGQPVSLSQLVSDLNVPPSKTTFVKGLMRLLAHNGLFTIIKSNNEEESEQSYDLTSASQLLLSGTDHCLSPMVQWALRPTRLEMYQHLGKWVRGKENTLRETAFGVGFYDFLNQNPADLAAFQEAMASDSAFMKVALSDLKSVFEGFSSVVDVGGGTGTTAKIICEAFPKLKCTVLDLPEIVAGLSGDTNLSFVSGDMIKSIPHADAVLIKWVLHDWGDDDCIKILKNAKEAICGKDKGGKVIIIDTVLNEKQDEHSLMETKLLYNIILMAEFNAKERTEGEWKQLFQKAGFTDYHMFPILGFRSLIVLHP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1651g00012 356 Gene3D Vaccinia Virus protein VP39 108 356 IPR029063 -
Pral1651g00012 356 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Pral1651g00012 356 Gene3D - 5 106 IPR036388 -
Pral1651g00012 356 PIRSF O-mtase 3 356 IPR016461 GO:0008168
Pral1651g00012 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 356 IPR016461 GO:0008168
Pral1651g00012 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 353 IPR029063 -
Pral1651g00012 356 FunFam Coniferyl alcohol 9-O-methyltransferase 4 106 - -
Pral1651g00012 356 Pfam O-methyltransferase domain 130 337 IPR001077 GO:0008171
Pral1651g00012 356 FunFam O-methyltransferase ZRP4 108 356 - -
Pral1651g00012 356 CDD AdoMet_MTases 195 294 - -
Pral1651g00012 356 PANTHER O-METHYLTRANSFERASE 16 339 IPR016461 GO:0008168
Pral1651g00012 356 SUPERFAMILY "Winged helix" DNA-binding domain 9 109 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1651g00012 Pral-Chr1651 131971 133991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1651g00012 31 337 Monolignol Biosynthesis Gene Families AT5G54160 30.380 1.28e-38 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1651g00012 K22588 - gmx:100818724 373.244