Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1648g00006 ATGCGTTACTACGGACTGCAGCCCCTGCAAGATGACCCCTACAAAAATGGGAGCCAAACGGGAAGTGTGCAATCTTTGGGAACTTCAGAGACAGTGCAGCCCATGAGTGCCCAGACTGCTTTTAGCTATGAAGGTATTATGGAGATAACAAATGGGTTTTCTAGTCAAAACATTATTGGAGAGGGGGGATTTGGTTGCGTTTACAAGGGTTGGCTGGCAGATGGAAGAGTTGTAGCAGTCAAGAAGCTGAAGGCGGGCAGTGGGCAAGGCGATCGGGAATTTCGTGCAGAAGTGGAGATTATCAGTCGTGTTCATCATCGACATTTAGTATCGTTAGTCGGTTATTGCATATCCGAGCAGCAAAAGATTCTTATGTACGAGTTTGTTCCCAATGGAACGCTCGATCATCACTTGCACGGAAAAGGAATGCCAGTGTTAGATTGGGCCAAGAGGGTGAAGATAGCAATTGGTGCCGCAAGAGGTCTGGCATATCTGCATGAGGATTGCCACCCAAAGATTATCCACAGAGATATAAAGTCAGCAAATATACTTTTGGATGATGCTTATGTGGCAAAGGTTTCGGACTTTGGACTTGCGAGGCTAACAGATGATGCCGATACTCATGTATCAACTCGTGTCATGGGAACCTTCGGGTACATGGCTCCAGAGTATGCAACAAGTGGAAAGTTAACAGATAGGTCGGATGTCTTCTCCTTTGGAGGTCTCCTAGAGCTTTTGACTGGAAGGAAACCAGTTGATCAAACTCAACCACTGGGAGAAGAGAGTTTGGTTGAGTGGGCCAGACCTCATCTCATTCATGCAGTTGATACTGGTGACTTCAACAAACTAATAGACACAAGGCTTGAAAATCATTATGTGGAGAGCGAAGTACTTAGAATGATTGACGCAGCTGCAGCATGTGTTCGCCATTCTGCTCCAAAACGGCCCCGGATGCTTCAGGTCGTAAGAGCCTTAGATAGTGGCAGTGAACCAGTTGACCTATCCAACGGAGTGAAATATGGTCAGAGCACTGCTTATGATTCTGGACAGTATGATGAAGAAATTATGAGATTTAGGATGATGAATGGTGTAAGCTTTAGCAGTTCTGAATTTGATTTGTATGATGAAGAATATAGTTCAAGAGAACTATCCGGCTTCCGACGTGCATTTGCTCGGGCTGGTTCGGGTGGCGAGTCCAGCTCTCAAGCTTTCAGCAAAGGTGGGAGCAGTGGGCAAACGAAGGAATGA 1248 0.4607 MRYYGLQPLQDDPYKNGSQTGSVQSLGTSETVQPMSAQTAFSYEGIMEITNGFSSQNIIGEGGFGCVYKGWLADGRVVAVKKLKAGSGQGDREFRAEVEIISRVHHRHLVSLVGYCISEQQKILMYEFVPNGTLDHHLHGKGMPVLDWAKRVKIAIGAARGLAYLHEDCHPKIIHRDIKSANILLDDAYVAKVSDFGLARLTDDADTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVXLLELLTGRKPVDQTQPLGEESLVEWARPHLIHAVDTGDFNKLIDTRLENHYVESEVLRMIDAAAACVRHSAPKRPRMLQVVRALDSGSEPVDLSNGVKYGQSTAYDSGQYDEEIMRFRMMNGVSFSSSEFDLYDEEYSSRELSGFRRAFARAGSGGESSSQAFSKGGSSGQTKE 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1648g00006 416 FunFam Proline-rich receptor-like protein kinase PERK8 26 128 - -
Pral1648g00006 416 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 31 368 IPR047117 -
Pral1648g00006 416 ProSiteProfiles Protein kinase domain profile. 53 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1648g00006 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Pral1648g00006 416 MobiDBLite consensus disorder prediction 394 416 - -
Pral1648g00006 416 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
Pral1648g00006 416 Gene3D Transferase(Phosphotransferase) domain 1 129 339 - -
Pral1648g00006 416 SUPERFAMILY Protein kinase-like (PK-like) 29 326 IPR011009 -
Pral1648g00006 416 Gene3D Phosphorylase Kinase; domain 1 17 128 - -
Pral1648g00006 416 SMART serkin_6 53 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1648g00006 416 CDD STKc_IRAK 59 327 - -
Pral1648g00006 416 FunFam proline-rich receptor-like protein kinase PERK8 129 341 - -
Pral1648g00006 416 Pfam Protein tyrosine and serine/threonine kinase 56 325 IPR001245 GO:0004672|GO:0006468
Pral1648g00006 416 MobiDBLite consensus disorder prediction 396 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1648g00006 Pral-Chr1648 48602 52177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1648g00006 36 401 Trihelix Transcription Factor Family AT1G70460 70.492 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral1648g00006 PK_Tyr_Ser-Thr 4.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1648g00006 - - cave:132179339 571.622