Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1645g00002 ATGGTTGAACCGGAGTTGTGTCTGATTAGATCGCCATTCTTGCTGTGCATCTTCGCTGGCCTCTTGCTACGTTCAGCATTCACTTCTGAAATTCCATTGGGTTCAAAACTTTCTGTGGTTGACAATGACAGCTGGGCCTCCTCCAATGGTGATTTTGCATTAGGATTCTTTAACACTTCAGATCAACCTAGTCAGTTCAGGATTGGCATACGTTTCAATTCAAAGTCTATGCCATTTAGCCAACAAACTGTGGTCTGGGTTGCTGGAGCTCATGTCACTGTGGGTAGCATGTCGTATTTCCAACTCACCCCCGAAGGGGAATTAGTCCTCTTTGATTCATTACAGGGAGTAGTATGGACCAGTGGAACTGCCAACCAATCTGTAGTTTCAGCAGCCTTCCGTGACAATGGCAATCTTGAGCTCATAGACAGAGAGCAACGTGTTGTTTGGCAGAGTTTTGATACTCCATCTGATACACTAGTCCCAGGGCAGAGTTTATCTGTGCATCAAACACTTCGAGCTGCCAGCAAGCAAACCACATCTAGTTACTACAGTCTTTACTTGAATGGCTCGGGACAGTTACATCTTCGATGGGAAAGTAATATTACCTATTGGACAAGTGATAGCCCTTCTATCGCAAATCTGAGTGCTTGTCTCACAACCTCTGGAGCCCTGCAACTTCAAGACCAAAGTTCAAAACCTGTTTGGTCAGTATTTGGTGAAGACCACAATGAATCAGTGAATTACAGGTTTCTTAGGCTTGATTTGGATGGCAATCTGCGCATATATTCATGGATAGACACGTTACAATCATGGAAATCAGTATGGCAGGCTGTTGAGAATCAGTGCAAGGTTTTTGCAACTTGTGGTCAACGTGGTATGTGTTTTTTAAGTGCTTCAGGTTCTGCTGATTGCCGATGCCCGTTTGAGTTAGCTGACCCTAACAAATGTTTGGTTCCATATGATGAGGCATGTGAATCTGGCATCAATATGCTTACATATGAGAAAACATTTCTATATGGAATTTACCCACCTGAAGATTCAATCACCATAAGTAGTTTGCAGCATTGCAAGCAGTTGTGTTTGAATGATCCACAATGTACAGTTGCAACCTTTTTGAATGATGGGAGTGCTCAATGCTCAATAAAGAAAACTAAGTATGTCACTGGTTTTGCAGATCCATCTCTAACCTCGGTATCTTTTGTTAAGAGATGTTCAGGTCCATTAGCTGTGAATCCTGGTCTTGTTAATTCACCTCCTCCCAAACAGCCTCCAGCACTTTGTGTTCCTTGTTTGATTGGAGCAGCCTCTGCCACTTTTTTCGTCTTTGCCATCATACAGTTGGGAATTGGTTTCTGGATCTGCAGAAGAAGAAACATCACTAGGAAAGAAGTTACTTTAGCTTTAACATGCCCCGTTTCGAAGGGTTTGTTTGTGTTGTCCTTCCCAGAGATAAGGAGCCTCACTGGGGATTTCAAGAACCAAATCGGTCCAAATATGTTCAAGGGTACACTGCAAGACAATCACTTGGTTGCAGTTAAGAATCTGAATGCCAGCATAGAAGAAAGGAGGTTCAGGAGCGCAGTTACAAAAATAGGAAGCATCCATCACAAGAACCTAGTGAAGCTGGAGGGCTACTGTTGTGAGTTCAATCACAGATTCTTGGTGTACGAGTATGTCAAGAATGGTTCTTTGGATAAGTTCTTTGGTGATTCAGCTCTTTGCAGGAGGCTAACTTGGAAAAAGAGACTTCAAATATGCTCAAGTGTAGCCAAATCCATTTGCTATTTGCACACCGAGTGTCGGGAGTTTCTTAGCCATGGCAATCTGAAGTGTGCAAATGTCTTACTGGATGAAAACTTGGAGGCCAAGGTAACTGAATTTGGGTTTGCAAGAGCAGATGGTGAGGCATCATATTGTGGTTCTTCAGCTGAGAAAGATGTGGAGGATTTTGGCAAGCTGGCATTAACTCTGTTATCTGGGCGTCAAGACACTGGGGATCTTTGCCGGTGGGCACATGAACAATGGATAGAAGGACGATCCATCAATGTGGTTGATAAAAGAATTGATGGTGGAATCGATTCAGAGGAGCTAGAACGTGCGTTGAGAATAATATTCTGGTGTCTTCAAATGGACGAACGGAGGAGGCCTTCAATGGGGGAGGTGGCAAGAGTGCTAGATGGTATATTGAATGTTGATCTTCCACCACCTCCTTTTGCTGTCCAGAGGCCATTGCTAGAAGATGATGATACTTAA 2256 0.4344 MVEPELCLIRSPFLLCIFAGLLLRSAFTSEIPLGSKLSVVDNDSWASSNGDFALGFFNTSDQPSQFRIGIRFNSKSMPFSQQTVVWVAGAHVTVGSMSYFQLTPEGELVLFDSLQGVVWTSGTANQSVVSAAFRDNGNLELIDREQRVVWQSFDTPSDTLVPGQSLSVHQTLRAASKQTTSSYYSLYLNGSGQLHLRWESNITYWTSDSPSIANLSACLTTSGALQLQDQSSKPVWSVFGEDHNESVNYRFLRLDLDGNLRIYSWIDTLQSWKSVWQAVENQCKVFATCGQRGMCFLSASGSADCRCPFELADPNKCLVPYDEACESGINMLTYEKTFLYGIYPPEDSITISSLQHCKQLCLNDPQCTVATFLNDGSAQCSIKKTKYVTGFADPSLTSVSFVKRCSGPLAVNPGLVNSPPPKQPPALCVPCLIGAASATFFVFAIIQLGIGFWICRRRNITRKEVTLALTCPVSKGLFVLSFPEIRSLTGDFKNQIGPNMFKGTLQDNHLVAVKNLNASIEERRFRSAVTKIGSIHHKNLVKLEGYCCEFNHRFLVYEYVKNGSLDKFFGDSALCRRLTWKKRLQICSSVAKSICYLHTECREFLSHGNLKCANVLLDENLEAKVTEFGFARADGEASYCGSSAEKDVEDFGKLALTLLSGRQDTGDLCRWAHEQWIEGRSINVVDKRIDGGIDSEELERALRIIFWCLQMDERRRPSMGEVARVLDGILNVDLPPPPFAVQRPLLEDDDT 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1645g00002 751 PANTHER OS07G0415500 PROTEIN 12 739 - -
Pral1645g00002 751 SMART blect_4 36 156 IPR001480 -
Pral1645g00002 751 ProSiteProfiles PAN/Apple domain profile. 325 405 IPR003609 -
Pral1645g00002 751 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 456 559 - -
Pral1645g00002 751 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 639 734 - -
Pral1645g00002 751 Pfam Protein tyrosine and serine/threonine kinase 506 643 IPR001245 GO:0004672|GO:0006468
Pral1645g00002 751 Gene3D - 25 155 IPR036426 -
Pral1645g00002 751 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 156 274 - -
Pral1645g00002 751 Pfam S-locus glycoprotein domain 244 307 IPR000858 GO:0048544
Pral1645g00002 751 ProSiteProfiles Protein kinase domain profile. 467 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1645g00002 751 ProSiteProfiles Bulb-type lectin domain profile. 30 154 IPR001480 -
Pral1645g00002 751 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 170 IPR036426 -
Pral1645g00002 751 Gene3D Transferase(Phosphotransferase) domain 1 641 733 - -
Pral1645g00002 751 Pfam PAN domain 341 389 IPR003609 -
Pral1645g00002 751 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 155 - -
Pral1645g00002 751 SUPERFAMILY Protein kinase-like (PK-like) 500 726 IPR011009 -
Pral1645g00002 751 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 560 638 - -
Pral1645g00002 751 Gene3D Transferase(Phosphotransferase) domain 1 563 640 - -
Pral1645g00002 751 Pfam D-mannose binding lectin 83 173 IPR001480 -
Pral1645g00002 751 Gene3D Hepatocyte Growth Factor 339 406 - -
Pral1645g00002 751 ProSiteProfiles Bulb-type lectin domain profile. 157 275 IPR001480 -
Pral1645g00002 751 SUPERFAMILY alpha-D-mannose-specific plant lectins 176 274 IPR036426 -
Pral1645g00002 751 SMART ntp_6 326 404 IPR003609 -
Pral1645g00002 751 Gene3D Phosphorylase Kinase; domain 1 455 559 - -
Pral1645g00002 751 CDD B_lectin 47 156 IPR001480 -
Pral1645g00002 751 PIRSF SRK 2 640 IPR024171 GO:0004674
Pral1645g00002 751 PIRSF SRK 642 750 IPR024171 GO:0004674
Pral1645g00002 751 Gene3D - 156 272 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1645g00002 Pral-Chr1645 23344 27123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1645g00002 413 733 Receptor kinase-like Gene Family AT1G56120 31.667 3.31e-39 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral1645g00002 PK_Tyr_Ser-Thr 2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1645g00002 - - gmx:100809478 1120.92