LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1638g00001	ATGGCTTCACCCACCACCCTCCTCTTCCTCATTCTCTTGGCTTTATCTTCCTCCTTAACCCCGGCTTGCTCACAACCCGCCACCACCTCCTCCAGATTCTCCCCAAAAGACAATATCCTCATTGATTGTGGTGCTGATTCTCCGGCCACCCTCCCCGACGGACGAATGTTCAAATCTGATGCAGAATCTCAAACGTACTTGAATGCCAGTGATGAGTATAAAGCCAACGATGGTCAAGCTAGCGTTTCTTCCCCTATTTATTCTAATTGCAGAATCTTCAAGCAGGAAGCTAAGTACTCTTTCCATTTGAGCGAACCTGGTTTTCATTGGGTTCGTCTTCATTTCTACCCTGTCAAAACTGATGTTTTTGATCTCCAGAAGGCCACTTTCTCTGTTAAGACAGAAAAATTTGTTCTGCTTCATAGTTTTAACTTCAACAACAGCGAAAATCCTATTGTTAAAGAGTACCTCATCAATGCAACCGACAGTCTCATGTCCTTAACCTTCACGCCCCTCAAGAATTCAGCTGCTTTCATCAATGCCATCGAAGTTGTTTCAGCCCCGGACAGTTTGATTTCCGACACAGGATCGGCTCTCTTCCCTGTTGGTGAATTCTCAGGCCTCACAAACTACGCCTTCCAAGCTGTTTACAGAGTCAACAATGGAGGCCCTCTAATCACATCCGCGAACGACAGTCTGGGAAGAACTTGGGTCCCAGATGAGAGTTTTCTCAAGAACAAGGACGTGGCGAAAAGTGTTTCGGTAGCCCCGAACGTCATTAAATTCCCCGAAAACCAACCCACCATGTCTCCTTTAATAGCCCCACAAACCGTATACTCATCAGCAACAGAAATGGCCGACGCACAAGTGAACCAAGCCAATTTCAACGTGTCGTGGAAATTCGACGTGGATACTGCTTTCAGTTACCTCATAAGACTCCATTTCTGCGACATCGTAAGCAAAAGTCTCAACCAGCTCTACTTCAATGTATACGTAAACCAGAAGATGGCGATTGCTAGCCTCGATTTGTCCTCCCTAACCGGAGCATTAACGACGCCGTTTTACAAAGACATTGTGGTGAACGCGTCGCTGATGGGGCAGGGGCTATCAATTCAGGTGGGTCCGGCACAACCAGATAGCGGCGACATGAATGCCATAGTGAATGGAATCGAAGTGATGAAGATGAGCAATACGGTGAACAGCTTGGACGGAGAATTCGGGGTGGACGGTCAGAGCAGCGGCGGTTCGAACAGGGGCACGGTGGCGGCGGTTGGGTTCGCAATGATGTTCGGAGCGTTTGTGGGGCTGGGGGCGATGGTGGTGAAGTGGCACAAGAGACCCCAAGATTGGCAAAGGAGAAACAGCTTCTCTTCATGGTTGCTTCCTCTTCATGCAGGTGACAATAGCTTCACGAAAAGCTCCATGGGCTCACACAAAAGCATTTTCAGCTCTTCCACAACGGGCTTGGGACGATACTTCTCATTCGCAGAGCTGCAAGAAGCAACCAAGAACTGGGACTCAAAGGCCATTATCGGAGTTGGTGGCTTCGGTAATGTCTACCTAGGAATCATCGACGAAGGAACAAATGTTGCCGTAAAAAGAGGAAACCCACAATCCGAACAGGGAATCAACGAGTTCCAAACAGAGATTCAAATGCTCTCCAAGCTAAGACACAGGCACTTGGTTTCTCTCATCGGATATTGCGACGAGAACGACGAGATGATCTTGGTCTATGAGTACATGTCCAACGGGCCTTTCAGAGACCATCTCTACGGCAAGAATCGGCCTCCTCTTTCATGGAAACAAAGACTCGAAATCTGCATCGGCTCGGCCCGCGGGCTTCACTATCTGCACACCGGAACCGCCCAAGGTATCATCCACCGCGACGTCAAGACCACCAACATCCTCCTCGACGATAACTTCACGGCCAAGGTATCTGATTTTGGGCTCTCCAAGGACGCACCAATGGGGCAAGGCTACGTCAGCACGGCGGTGAAGGGTAGTTTTGGGTATTTAGACCCGGAGTACTTCAGGAGGCAGCAATTAACAGATAAATCAGATGTTTATTCTTTTGGGGTAGTTTTGTTGGAGACACTGTGTGCTAGGGCCCCCTTGTGCCCTCAATTACCCAGAGAACAAGTGAACTTGGCGGACTGGGCGATGCAGTGGAAGAGGAAAGGGTTGCTTGATAAGATCATAGACCCTGCTCTTGTGGGAACAATCTGCCCAGAATCGATGAACAAGTTTGCAGAAGCAGCTGAGAAATGTTTAGCAGATTATGGAGCTGATAGGCCATCAATGGGGGATGTGTTGTGGAACCTGGAATATGCATTGCAGCTTCAAGAAGCTTACGTGCAGGGAAAATCCGACGATGTCCCTGATCCTATGCCTTCACCGGCGTCCACTGCAACACCGGCGGCGAATTCTTCTCTTCCTCCCGCTGCCCCAACGACAACCTCGGAACAACCACCTAGTACCACTCCTACTCCTCAATATATCACCGACCTGCCAGAAAACAAACCCATTGATGATCATTCTGGAACAGCCGTGTTTGCCCAGTTCGCTAACAACCTCAGCGGCAGGTAA	2586	0.4919	MASPTTLLFLILLALSSSLTPACSQPATTSSRFSPKDNILIDCGADSPATLPDGRMFKSDAESQTYLNASDEYKANDGQASVSSPIYSNCRIFKQEAKYSFHLSEPGFHWVRLHFYPVKTDVFDLQKATFSVKTEKFVLLHSFNFNNSENPIVKEYLINATDSLMSLTFTPLKNSAAFINAIEVVSAPDSLISDTGSALFPVGEFSGLTNYAFQAVYRVNNGGPLITSANDSLGRTWVPDESFLKNKDVAKSVSVAPNVIKFPENQPTMSPLIAPQTVYSSATEMADAQVNQANFNVSWKFDVDTAFSYLIRLHFCDIVSKSLNQLYFNVYVNQKMAIASLDLSSLTGALTTPFYKDIVVNASLMGQGLSIQVGPAQPDSGDMNAIVNGIEVMKMSNTVNSLDGEFGVDGQSSGGSNRGTVAAVGFAMMFGAFVGLGAMVVKWHKRPQDWQRRNSFSSWLLPLHAGDNSFTKSSMGSHKSIFSSSTTGLGRYFSFAELQEATKNWDSKAIIGVGGFGNVYLGIIDEGTNVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMSNGPFRDHLYGKNRPPLSWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKTTNILLDDNFTAKVSDFGLSKDAPMGQGYVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLETLCARAPLCPQLPREQVNLADWAMQWKRKGLLDKIIDPALVGTICPESMNKFAEAAEKCLADYGADRPSMGDVLWNLEYALQLQEAYVQGKSDDVPDPMPSPASTATPAANSSLPPAAPTTTSEQPPSTTPTPQYITDLPENKPIDDHSGTAVFAQFANNLSGR	861

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1638g00001	861	Gene3D	-	212	397	-	-
	Pral1638g00001	861	Gene3D	-	38	188	-	-
	Pral1638g00001	861	FunFam	receptor-like protein kinase FERONIA	468	580	-	-
	Pral1638g00001	861	Gene3D	Phosphorylase Kinase; domain 1	467	580	-	-
	Pral1638g00001	861	FunFam	Receptor-like protein kinase FERONIA	212	397	-	-
	Pral1638g00001	861	FunFam	Receptor-like protein kinase FERONIA	581	792	-	-
	Pral1638g00001	861	ProSiteProfiles	Protein kinase domain profile.	505	777	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1638g00001	861	SMART	serkin_6	505	777	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1638g00001	861	PANTHER	OS07G0166700 PROTEIN	491	781	IPR045272	GO:0004714\|GO:0006468
	Pral1638g00001	861	ProSitePatterns	Protein kinases ATP-binding region signature.	511	533	IPR017441	GO:0005524
	Pral1638g00001	861	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	625	637	IPR008271	GO:0004672\|GO:0006468
	Pral1638g00001	861	Pfam	Malectin-like domain	41	395	IPR024788	-
	Pral1638g00001	861	SUPERFAMILY	Protein kinase-like (PK-like)	479	775	IPR011009	-
	Pral1638g00001	861	Gene3D	Transferase(Phosphotransferase) domain 1	581	794	-	-
	Pral1638g00001	861	MobiDBLite	consensus disorder prediction	787	847	-	-
	Pral1638g00001	861	CDD	STKc_IRAK	511	775	-	-
	Pral1638g00001	861	MobiDBLite	consensus disorder prediction	801	834	-	-
	Pral1638g00001	861	Pfam	Protein tyrosine and serine/threonine kinase	509	712	IPR001245	GO:0004672\|GO:0006468
	Pral1638g00001	861	FunFam	Putative receptor-like protein kinase	38	188	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1638g00001	Pral-Chr1638	5211	8036	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1638g00001	33	861	Receptor kinase-like Gene Family	AT4G39110	67.186	0.0	1173

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Pral1638g00001		Malectin_like	1.3e-40	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1638g00001	-		-	gmx:100793784	1264.6