Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1633g00006 ATGACCGTGGAGAGGGGAACTGTGTTGGTGGGGATAAGAATCGACAGCCAAAGCAGGCAGCTTCTAAACTGGGCTCTTGTCAAAGTTGCTCAACCTGGAGACTGCGTTGTTGCAGTTCATGTGGTCAAGTGTCCAGGTCAAGTTTCAAAAAATAAGCCCCTGCTGGACAATTATTTGGAGGTTTATGATGGCCTATGTGATGTGAAAAAAGTAAGTCTCATAGGTCAAATCTTCGGAGGGAGATCCGTTCGAAACATTCTTGTGAGAGAGTCAAAGAATAATTCTGCTCTGGCTCTAGTGGTTGGTGGTGGTGCTGCCACAGCAAAACATTGTGCCAAACGACTCCCACCCACCACAGATGTTGTAGCCATCCATGATGGAAGAATTGTCTTCAGAAGGTGTACCAATCTTAAACTACCAGGTCTTATACAAGATCCGAGGCCTAGCCTCACAAGCATGGATGACAAAGAATTCCTGTCTGAATATGGAGACTCCGAGGTTGCCACTGTGAAATCATTATTTTATGAAGAGACGAGAGAAGATGTGCCAGAATTCAAAGAAGTATTTGGCGGTGTTAAAGGGAGCAAGAAAGGGTATTCAAGAGCAATCTCTCTGTTTGTAGGTGACCCCTGTGAGCAGAAACTAGGATGGCCCTTGCTCCGAAGAGTTAATTCAGAAATATCAGAGACTCCTCTTTCGAGGAACTTGTCTGTAGTACAGTGGGTAATGAACTTACCAGATCGTTCGCCAAAGAAAAGTTCTTGCTTTTCATCCACGGAAGAAAGTCTCTCAGAAAGAGGCATCAGTGATGTTGAGGATGACAGACAGAAAAACAGTTCCCGTTCTTTATCTTTTGAGCTGCCAAAGGACTTGGAGGCGATTTTGGACGTGAATTCATTTGATTGCAAGTGGTTTAACATTGAGGATCTCAAGTCCTGGACTTCTCAATTCTCTTCAGGAAATCTGATTGGCAAAGGAGGGAGTAACCGTGTGTACAAAGGGATTCTCCCTGATGGAAAACCAATTGCAGTGAAAGTTTTACAATCATCAAAAGAAGCTTGTAGAGATTTTGCACAGGAAGTGGAAATAATATCCTCTTTGAAGCACAAATACATAACCCCTTTGCTTGGAATTTGCGTTGCAGAAAATGCTTTAATCTCTGTCTATGAATTTTTCCCCAAAGGAAGCTTAGAGGAAAATTTACACGGTGAGAACAAGGATGGATCCATATTGTCATGGCAAGAGAGATTTAATATGGCTGTTGGCATAGCAGAAGCCCTAAATTACCTTCACAACGAAACTTCGAAGCCTGTTATCCACAGGGATGTCAAGTCTTCAAATATTCTTTTGTCCCATGAGCTTGAACCACAATTGACTGATTTTGGGCTTGCAATTTGGGGACCAACAAGTTCATATTTTCTGACACAAGAAGATGTAGTAGGAACATTCGGATATCTTGCTCCTGAATACTTCATGTATGGAAAATTAAGTGACAAGATAGATGTGTATGCCTTCGGTGTAGTTCTTCTTGAACTAATTTCAGGAAAGAAACCAATCAGTTCCGAGATTTGCAAAGGACAACGAAGTTTGGTCGCGTGGGCAAAACCAATAATAGAGAGTGGGAACATTAAAGGCTTATTGGACTCCAATTTAGAGGGGAAATTTGACGAGGTCCAAATGCAGAGAATGGTTAAGGCAGCAAATCTATGCATTACAAGGGCTGCTAGGCTTCGTCCCAAGATGAACCAGATACTGAAGATCCTTGAAGGAGAAGAAAGAGATGAGAATTTTCTGAGCTCCCAAGGGTTTGATAGTGAGCATACAGAAAACCAGGAGAATATAGACGACGAAGTGTATCCAAATTCAAGTGCAGAGTTACACCTTAGTCTTGCATTGCTTGATGTTGATGATGATTCTACTTCAAATAGCAGCAGTACAGAGCGGAGTAACAGTCTTTCTTTGGAAGAACACTTGAAAGAAAGATGGAGCAGATCATCCAGTTTTGATTAG 2010 0.4209 MTVERGTVLVGIRIDSQSRQLLNWALVKVAQPGDCVVAVHVVKCPGQVSKNKPLLDNYLEVYDGLCDVKKVSLIGQIFGGRSVRNILVRESKNNSALALVVGGGAATAKHCAKRLPPTTDVVAIHDGRIVFRRCTNLKLPGLIQDPRPSLTSMDDKEFLSEYGDSEVATVKSLFYEETREDVPEFKEVFGGVKGSKKGYSRAISLFVGDPCEQKLGWPLLRRVNSEISETPLSRNLSVVQWVMNLPDRSPKKSSCFSSTEESLSERGISDVEDDRQKNSSRSLSFELPKDLEAILDVNSFDCKWFNIEDLKSWTSQFSSGNLIGKGGSNRVYKGILPDGKPIAVKVLQSSKEACRDFAQEVEIISSLKHKYITPLLGICVAENALISVYEFFPKGSLEENLHGENKDGSILSWQERFNMAVGIAEALNYLHNETSKPVIHRDVKSSNILLSHELEPQLTDFGLAIWGPTSSYFLTQEDVVGTFGYLAPEYFMYGKLSDKIDVYAFGVVLLELISGKKPISSEICKGQRSLVAWAKPIIESGNIKGLLDSNLEGKFDEVQMQRMVKAANLCITRAARLRPKMNQILKILEGEERDENFLSSQGFDSEHTENQENIDDEVYPNSSAELHLSLALLDVDDDSTSNSSSTERSNSLSLEEHLKERWSRSSSFD 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1633g00006 669 Gene3D Phosphorylase Kinase; domain 1 284 391 - -
Pral1633g00006 669 PANTHER OS08G0249100 PROTEIN 232 612 IPR046958 -
Pral1633g00006 669 ProSiteProfiles Protein kinase domain profile. 317 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1633g00006 669 SUPERFAMILY Protein kinase-like (PK-like) 300 589 IPR011009 -
Pral1633g00006 669 SMART serkin_6 317 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1633g00006 669 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 286 391 - -
Pral1633g00006 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Pral1633g00006 669 MobiDBLite consensus disorder prediction 652 669 - -
Pral1633g00006 669 MobiDBLite consensus disorder prediction 637 669 - -
Pral1633g00006 669 Pfam Protein kinase domain 319 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1633g00006 669 FunFam Putative receptor-like serine/threonine-protein kinase 392 603 - -
Pral1633g00006 669 CDD USP_Like 7 102 - -
Pral1633g00006 669 Gene3D Transferase(Phosphotransferase) domain 1 392 603 - -
Pral1633g00006 669 MobiDBLite consensus disorder prediction 637 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1633g00006 Pral-Chr1633 28294 32562 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1633g00006 305 591 Trihelix Transcription Factor Family AT1G70460 43.151 2.99e-73 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pral1633g00006 Pkinase 3.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1633g00006 - - gmx:100789189 833.943