Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1632g00010 ATGGAGTCTAGAATTACCATTTCTGATTCCAACGAGATCAGCAATAATGGAAGCGGAGTATGTTGTATAGCCAGCACTTCCCGAACCCATTTAACTCCGGAAGCTTCACCTCCTTTAGATGTTGCAGCCCTAAGCCGCCTCTCCGACAACCTCGCATCAATCTTCGAAACCTCGGAGTCCGACGCCTTCTTTGCCGACGCCAGAATCGTTCTCGGTGACGGTAGGGAAGTTCCGGTTCACCGCTGCATTCTGGCGGCGAGAAGCCCTTTCTTCAAGAGGGTGTTCTCTGGGAAGGAGAGGAATGGAGTGAAATTGGAATTGAAGGAATTGGCTAAGGATTACGAGGTTGGTTTCGATGCGATTGTGGGTGTTGTGAGTTATTTGTATAGTGGGAAACTAAGGTCACCGCCCAAGGGTGTTCGTGTGTGTGTGGACGATGATTGCTCCCATCTTGGCTGTCGACCTGCAGTGGAATTCATGGCTGAACTGCTCTATGCTTCTTCAACGTTTGAAATATCTGAGTTGGTTGATCTTTATCAGAACTATCTGCTACAAATTCTTGACAAGGCAGCAGCAGATGACATTTTGCTGGTTCTTTCTGTTGCAAGTATATGTGGAAAATCCTGCGAGACACTTCTAGGAAGGTGTACTGAGTTGATTGTTAAATCTGATGTTGATGTCATTACTCTTGAAAAAGCTCTGCCACAGCAAATTATGAAACAAATTATTGATAAACGTATAGAACTAGGCTCAGAAGACAAGTCCAACAACATCTGTTTGCCAGATAAATTTGTGAAGAGAATACATAGGGCTCTTGATTCTGATGATGTTGAGTTAGTCAGGTTGCTCTTGAGGGAGGGACATACTAATCTAGATGATGCTTATGCCCTTCACTATGCTGTTGCATACTGTGATGCCAAGACTACTACTGAGCTTCTTGATCTCGGGCTTGCTGATGTTAATTGTAAAAATTCAAGGGGATATAGTGTGCTCCATGTGGCTGCAATGAGGAAGGAGCCTAAGATTATAGTGTCCCTTTTGACCAAGGGAGCTCAGCCTTCTGATCTCACTTTGGATGGTAGGAAAGCCCTTCAAATTTCTAAGCGCCTCACCAAGGCAGTGCATTATTATGGTGCTGAGGAAGGCAAAGCATCTTCTAGGGACAGATTGTGCATAGAGATATTAGAACAAGCTGAGAGAAGAGAGCCTATACTTGGGGAGGCTTCTTTTTCTCTTGCTATGGCAGGGGACGATTTGCGCATGAAACTGTTATACCTTGAAAACAGAGTTGGACTGGCGAAGCTATTGTTTCCAATGGAAGCGAAGGTTGTATTGGACATTGTTCAAATTGATGGAACCTGTCCATTTTCAGATATATCTCAAAATGTGAGTACTAATACTCAGAGGACAGCAGTGGATTTGAATGAGGCACCTTTCAAAATAAAGGAGGAGCACCTAACAAGGATGAGAGTACTCTCTAAATCTGTTGAACTAGGCAAACGATTCTTTCCTCGTTGTTCGGAAGTTCTGAACAAGATCATGGATACTAATAACCTATCACAGATTGCATGTATGGGCAATGACACTCCAGAAGAAAGACAAGCCAAGAGAAGAAGGTACGTGCTGCTCCAAGAAGTTCTGAGTAAGGCTTTCATGGAGGACAAGCAGGAGTTTGATAAGTCTACAGTCTCATCATCTTCTTCTTCACCATCAATAGGCATGGTTAGGAGAAACCCATGA 1740 0.4391 MESRITISDSNEISNNGSGVCCIASTSRTHLTPEASPPLDVAALSRLSDNLASIFETSESDAFFADARIVLGDGREVPVHRCILAARSPFFKRVFSGKERNGVKLELKELAKDYEVGFDAIVGVVSYLYSGKLRSPPKGVRVCVDDDCSHLGCRPAVEFMAELLYASSTFEISELVDLYQNYLLQILDKAAADDILLVLSVASICGKSCETLLGRCTELIVKSDVDVITLEKALPQQIMKQIIDKRIELGSEDKSNNICLPDKFVKRIHRALDSDDVELVRLLLREGHTNLDDAYALHYAVAYCDAKTTTELLDLGLADVNCKNSRGYSVLHVAAMRKEPKIIVSLLTKGAQPSDLTLDGRKALQISKRLTKAVHYYGAEEGKASSRDRLCIEILEQAERREPILGEASFSLAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVVLDIVQIDGTCPFSDISQNVSTNTQRTAVDLNEAPFKIKEEHLTRMRVLSKSVELGKRFFPRCSEVLNKIMDTNNLSQIACMGNDTPEERQAKRRRYVLLQEVLSKAFMEDKQEFDKSTVSSSSSSPSIGMVRRNP 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1632g00010 579 Pfam Ankyrin repeats (3 copies) 269 353 IPR002110 GO:0005515
Pral1632g00010 579 CDD BTB_POZ_NPR_plant 46 187 - -
Pral1632g00010 579 ProSiteProfiles Ankyrin repeat profile. 326 358 IPR002110 GO:0005515
Pral1632g00010 579 Gene3D - 236 478 IPR036770 -
Pral1632g00010 579 Pfam BTB/POZ domain 59 185 IPR000210 GO:0005515
Pral1632g00010 579 FunFam BTB/POZ domain and ankyrin repeat-containing protein NPR1 236 389 - -
Pral1632g00010 579 SMART ANK_2a 326 355 IPR002110 GO:0005515
Pral1632g00010 579 SMART ANK_2a 263 291 IPR002110 GO:0005515
Pral1632g00010 579 SMART ANK_2a 292 322 IPR002110 GO:0005515
Pral1632g00010 579 SMART BTB_4 65 187 IPR000210 GO:0005515
Pral1632g00010 579 Pfam NPR1/NIM1 like defence protein C terminal 368 569 IPR021094 -
Pral1632g00010 579 MobiDBLite consensus disorder prediction 555 579 - -
Pral1632g00010 579 SUPERFAMILY POZ domain 45 186 IPR011333 -
Pral1632g00010 579 ProSiteProfiles BTB domain profile. 65 137 IPR000210 GO:0005515
Pral1632g00010 579 MobiDBLite consensus disorder prediction 561 579 - -
Pral1632g00010 579 SUPERFAMILY Ankyrin repeat 267 368 IPR036770 -
Pral1632g00010 579 PANTHER REGULATORY PROTEIN NPR3 5 571 IPR044292 GO:0009862|GO:2000022|GO:2000031
Pral1632g00010 579 Gene3D Potassium Channel Kv1.1; Chain A 40 222 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1632g00010 Pral-Chr1632 47742 51631 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pral1632g00010 NPR1_like_C 2e-82 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1632g00010 K14508 - tcc:18588372 786.949